PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024978063.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 319aa    MW: 34810.6 Da    PI: 10.0348
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024978063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.62e-31248305359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh 
  XP_024978063.1 248 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGDHNHA 305
                     99************************988****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MAVDLIMGFT TTTASAENNV VQEAASGLES VQKLIRLLSQ SQSQQQQSPV DYKAVADVAV  60
TKFKRVISLL GRPSRELTGH ARFRRAPVSN GRFQDQKIMK DHEQDEVVSE EGETKVYCPT  120
PIQQVPFVPP PPPPAPVTSN QPAVFQRKDS LPKTISFSYS HAASRTSSFM SSLTGDSDSK  180
QLSAGGKPPL CSSSCLKRKC SSSDNGASGK CSGGSSGRCH CSKRRKLRMK RVIRVKAISM  240
KLADIPPDDY SWRKYGQKPI KGSPHPRGYY KCSSVRGCPA RKHVERALDD PTMLIVTYEG  300
DHNHALSVAE TSGLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-65WRKY family protein