PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024977384.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 227aa    MW: 24902.8 Da    PI: 8.5093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024977384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-192574356
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++GVr ++ +g+++AeIrd ++    ++r++lg+f +aeeAa+a+++a+++l+g+
  XP_024977384.1 25 FRGVRKRP-WGKFAAEIRDpWK----KARIWLGTFNSAEEAARAYDNAARSLRGA 74
                    8*******.**********883....5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MRRGKPAAAA PAAPVINGSG SEIRFRGVRK RPWGKFAAEI RDPWKKARIW LGTFNSAEEA  60
ARAYDNAARS LRGAKAKTNF ASTVTTEFLN LQNGNDHHPL FHQHSRMYHH SYQAEHQIVV  120
SQRPCCSSMS STVESFSGPR PMTTAEVVFP RRHHPRSPPV LPDDCHSDCD SSSSVVVDGD  180
GKGGDMGDIA SSSSRKPSLQ FDLNLPPPLD EVESPTNDDL ICTALRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.14e-41ERF family protein