PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024976361.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 384aa MW: 43303.1 Da PI: 7.7198 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 70.6 | 1.8e-22 | 24 | 89 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ ++v l+e+a +L v +rRRiYDi+NVLe+++++ +k+kn + wkg XP_024976361.1 24 RKQKSLGLLCSNFLSLYNRDGVETVGLDEAAARL---GV--ERRRIYDIVNVLESVGVLVRKAKNTYYWKG 89 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 73.6 | 2.2e-23 | 156 | 236 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+llt++flkl+ ++++++++l+++ak L+ + +++k+RR+YDi+NVL+++n iek ++k+++rw g XP_024976361.1 156 RKEKSLGLLTKNFLKLFLCTTSDMLSLEDAAKILLGDarnpsLTRTKVRRLYDIANVLSSMNFIEKihhpeTRKPAFRWLG 236 79***************************************98889*********************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MALPLPSPSL PAKESASGST TYCRKQKSLG LLCSNFLSLY NRDGVETVGL DEAAARLGVE 60 RRRIYDIVNV LESVGVLVRK AKNTYYWKGM GAIPKALEQL KEEGFRNNDE TIDCKSGKIS 120 DDDEDERFSN HSASFQDKVD LDSMHKVPGS FKSENRKEKS LGLLTKNFLK LFLCTTSDML 180 SLEDAAKILL GDARNPSLTR TKVRRLYDIA NVLSSMNFIE KIHHPETRKP AFRWLGMRGR 240 TDSETGTSNA LVHKESKKRT FGTELTNICF KRNKLVSPID VGINEDIKPL DPQGGSQPVK 300 CNTDRCNSDQ VPEQFGPSVP PICLPKSCDE ESNEVKKSHD WESLASTYRP QYHNQALRDL 360 FVHYMDAWKS WYSEVAEMDP IQVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-111 | E2F/DP family protein |