PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024974846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 678aa MW: 78407.8 Da PI: 7.0707 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 57 | 6.5e-18 | 131 | 226 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 k+Y++YA+e+GF+vr s++k + + g+it+r +vCsk+g++ ++ + +++ r+++++ gC a++k++ k + +ev+k+ ++HnH XP_024974846.1 131 KMYQKYANEAGFDVRLSNKKIN-KIGRITSRFYVCSKKGRPPSKYFDsldvlpGDRRIRNSNVKCSGCGACFKIHYVKeRRLYEVYKFIEQHNHM 224 68***************98887.6667**************99998899**988888899999999**********998999************9 PP FAR1 89 la 90 l+ XP_024974846.1 225 LF 226 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 678 aa Download sequence |
MDYMSFNETF SKDIVEESSV FDSMNDCQGF DYGGENATAV NDETIEDQCN YSMRNEDGCN 60 DRNETLCEHN DGVFVDFVDD DVASLSNESE EYRFDGMGET SDGSKCWFPN IDSKHKPKVG 120 DGFETVESAE KMYQKYANEA GFDVRLSNKK INKIGRITSR FYVCSKKGRP PSKYFDSLDV 180 LPGDRRIRNS NVKCSGCGAC FKIHYVKERR LYEVYKFIEQ HNHMLFNKEE MRFSRSKRQL 240 HYGDHKNVFH GSSSKVGVTK SHRFRAITGD VDCSGGTVRD HQNCKRDMAY FVGNEEAQML 300 LNVMSNRRKE LLAIFWADET ARSNYREFGD AISFDATFRM NKHAMIFVLF VAIDNHKKSV 360 VVGATLIHNE SVVDYTWVLK AFVKADGRQP RFVITDQCAS MKQAILIAFP ESKHRLCMWH 420 ITKKLKSKNV HLAPDEFEMK WNNMMDLYGL RGDSWFDELY EIRESWIPAY YKDYHMSGLM 480 KTTSSQWTTH GLLEVTTKST VPRLVSPCKL EAYAVEVVKN KMENSYECSC NCFVRNGILC 540 RHALKVMLND EVDRIPYRYI LRHWRRDLVP VEWLPARFRY GEVDADKESL MSVAYSYFER 600 ILGRVQKEKH ILSKFVDQLQ EWDTKIDSEL PLQSHTQETT TSIKEFLGVS QPENIDVLPP 660 TGIRNKGCGT SKRLISAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-39 | FAR1 family protein |