PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968512.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 166aa    MW: 18351.4 Da    PI: 9.0652
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968512.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.4e-201766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+WvAe+r p++   r r++lg+++taeeAa+a++aa  +l+g
  XP_024968512.1 17 RYKGVRMRK-WGKWVAEVRQPNS---RDRIWLGSYDTAEEAARAYDAALFCLRG 66
                    69*****99.*******888732...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MVRPTGGGGR KERKEGRYKG VRMRKWGKWV AEVRQPNSRD RIWLGSYDTA EEAARAYDAA  60
LFCLRGPSAL INFPNHPPDI PITADLSPSQ IQVAASRHAR GLSTDSSSLA QVAGNLRTGY  120
QDEQECNLFR EYRNATSNYF PVEEGGGGGG GDEGVVGFER QRLWGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-27ERF family protein