PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024967742.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 320aa MW: 34395 Da PI: 9.5689

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024967742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.1	1.9e-38	75	134	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e l+cprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_024967742.1 75 EPGLNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSN 134 56789****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MVFSSVTPFL DHHNWHQQLQ QSNHQQGSGG GGENPNFQPP LAPPQHGGGG GGGEGSIRPG 60 SMVDRARLAK LPMPEPGLNC PRCDSTNTKF CYFNNYSLTQ PRHFCKTCRR YWTRGGALRN 120 VPVGGGCRRN KRSNKSSRNS KSPSQKGAKS ISGSPSRCST ENIATSAQLS HPPSLQLPFM 180 NSYGGVAGNI TSNLGGFHTQ NEMGNFQLGT GSSNANNFSN ILSIGSGESW RLPFLAGIEI 240 PNSSNLFHYQ NEGAVEAPSS MTENSQADPP VKVEANRGLN LSRQILGVSE HTNQQPWPVG 300 NTWADFSGVN TSSTPTTHFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	5e-42	Dof family protein