PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024967729.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 294aa    MW: 32027.7 Da    PI: 5.2484
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024967729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.7e-20132182255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+++a+ kl+g
  XP_024967729.1 132 HYRGVRQRP-WGKFAAEIRDP---NkKGTRVWLGTFDTAVEAAKAYDRAAFKLRG 182
                     8********.**********9...4345*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MASPDESSAL DLIRQHLLID DLSFLQTYSA LSDNDSNNTH KSDFFFHQVS STNSPSSSSS  60
SPVFEPVSDE QFEFNVMPES MLSFNSWKQT GNGSGSSFNE RKPSLNISIP FPPPVIEKSP  120
EPTVAVFEEK KHYRGVRQRP WGKFAAEIRD PNKKGTRVWL GTFDTAVEAA KAYDRAAFKL  180
RGSKAILNFP LEVGNLNEAA VAPVVKSNGR KRVAREAEVE ERQSGKEMKK ETATETAESS  240
GVKPTDAACG PLTPSNWTAV WDCGEGDGNG KGIFEVPPLS PCPTVGFSSG CMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.14e-50ERF family protein