PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024964573.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 431aa MW: 49694.6 Da PI: 7.43 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 25.9 | 3.2e-08 | 146 | 196 | 47 | 90 |
FAR1 47 k......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 + +++ r+++++r gC a++k++ k + ++ev+k+ ++HnH l+ XP_024964573.1 146 DsldvlpCDRRIRNSNVKRSGCGACFKIHFVKeRRQYEVYKFIEQHNHMLF 196 356666566788999**************99989**************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence |
MDYMPFNEIF SKDIVEESSV FDSMNDCQGL DYGGENATAV NNETIEDQAN YSMRNEDGCN 60 DKKETVSEHN DGVFVDFVDI DVASLSNEAE DXXSDGMGET NDGSKCWFPN VDVEYKPKVG 120 DGFETVESAE KMYRNKEGRP PSKYFDSLDV LPCDRRIRNS NVKRSGCGAC FKIHFVKERR 180 QYEVYKFIEQ HNHMLFNKEE MRFSRSKRQL HYADHKTVFH GSSLKVGVTK SHRFRKAITG 240 GVDCSGGTVR DHQNFKRDMA YFVGNKDAQM LLNVMSNRRK ELLAIFWVDE TARSNYREFG 300 DTISFDATFR TNKHAMIFVP FVAIDNHKKS VVVGAALIHN ESVVDYTWVL KDFVKAHGRQ 360 PRFVITDQCA SMKQAILIAF PKSKHRLCMW HITKKLKSKI SNNLQHRTPF VSEFNKLVWN 420 VHLGPDEFEM K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-34 | FAR1 family protein |