PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963927.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 337aa    MW: 36913.3 Da    PI: 8.4083
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.21.7e-3285141360
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                      vrY+eClkNhAas+Gg a+DGCgEfmps geegt +al+C+AC+CHRnFHR+e e e
  XP_024963927.1  85 VVRYRECLKNHAASMGGSATDGCGEFMPS-GEEGTLEALTCSACNCHRNFHRKEIEGE 141
                     68**************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MELQRGEMAI PINSRYGGGH GHGHMIHHES APHNHIVPSS AAAVQQQPQQ IPITNGPTII  60
VPPPSSSSME ETVIPNSNNS HRMVVVRYRE CLKNHAASMG GSATDGCGEF MPSGEEGTLE  120
ALTCSACNCH RNFHRKEIEG EAHQLSYDYN YHSAPPHLNR SIGHGNGRKV IFQGHHHRGI  180
LGTESFGYNH NNAGMLVPSR APPRMIMSYN MGIESLPSES DEQEDGGGGG GGGGGGGGGG  240
GDDGGGFMSR HPQPHQMVMK KRFRTKFTQE QKDKMLSFAE KVGWKFQKQQ ESVVQQFCQE  300
LGIKRRVLKV WMHNNKHSLA KKINPIPTDP QNQINNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.14e-71ZF-HD family protein