PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961953.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 266aa    MW: 30314.7 Da    PI: 7.1066
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.62.4e-321972255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    prlrWtp+LH++Fv+a+++LGG+ekAtPk +l++m+v gLt++hvkSHLQ+YR+
  XP_024961953.1 19 PRLRWTPDLHHSFVHAIDRLGGPEKATPKLVLQMMDVRGLTISHVKSHLQMYRS 72
                    8****************************************************7 PP
2Myb_DNA-binding47.25.3e-152071148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT++++  +v+a+ +lGg+   t+k++ ++m   g+t  ++ks++q+y+
   XP_024961953.1 20 RLRWTPDLHHSFVHAIDRLGGPekaTPKLVLQMMDvRGLTISHVKSHLQMYR 71
                     89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGSCGRNGAV RQYIRSKVPR LRWTPDLHHS FVHAIDRLGG PEKATPKLVL QMMDVRGLTI  60
SHVKSHLQMY RSMKSDGNKQ EDEDLNSIGS HRRQSLEDHH DGCLDHEHHL KPTIQDSDSH  120
FIYTLPSKRM ETRNGKHEWW ENGEQIEQEE AIGNLTWQQP SLSFSFPHFL MHPSFTHVNA  180
LHPESDFLKI FEHCGSPKRR KLEGSRSTED EDGLLKLSLH HHSTQRSSNG SSSSEMSEVY  240
SRPNVNDGSL NKCSVNLDLS IALSGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-33G2-like family protein