PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929389.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 310aa    MW: 34172.2 Da    PI: 6.5177
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH120.000381922301255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_023929389.1 192 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 230
                     6677888999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MMAGNPNWWS MPPPSLLPPQ YALGSSSLPF NPLAAENQEL PQSWSQLLLG GLSASDEESF  60
RLSHFQPKKL ENWDDQILNQ SQRVLPVNVD VIKQEISQNS NLYGLEDHEE FQALPRQAAW  120
SQQIMPVSSP RSCVTSLSNN NILDFSYKKM DGSNQNLDHS SESTSSATGG AYKKARVQPS  180
STSSQPPLKQ VRKEKLGDRI TSLHQLVSPF GKTDTASVLL EAIGYIRFLQ GQIEALSSPY  240
FGNASKNMRS QQSLLNDACL KRKEAPNQDT QDKPRDLKSR GLCLVPVSCT QLVGNDNGAD  300
FWAPAYGGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-54bHLH family protein