PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023929269.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 807aa MW: 93387.8 Da PI: 6.1016

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023929269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.2	3.2e-19	9	88	9	90
FAR1 9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + GFs+rk k ++ + +++i +r+f Cskeg+r +e+ e+++ ++ etrtgCka ++ + e +++w+vt ++ eHnHela XP_023929269.1 9 NGGFSIRKGKPRYFNGTKNIRQREFLCSKEGFRVDEDPC-EEKNWNKLETRTGCKAFIHFTVE-NDVWRVTAFNPEHNHELA 88 67*******************************9988.89999*************9.9*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MEEPNFQSNG GFSIRKGKPR YFNGTKNIRQ REFLCSKEGF RVDEDPCEEK NWNKLETRTG 60 CKAFIHFTVE NDVWRVTAFN PEHNHELALP SERHLLRSGC RISKPKAGLI DSMVNAGIST 120 KNTYLYLTEE VGGSENVGFT EKDCYNHVNT KKMSTISAGD AQSLLNHFKK RQIEDPMFFY 180 TVQVDQENRM TNFFWRDGRS RVDYDCFGDV VVFDTTYRTN RYNLTCAPFV GVNHHWQNVI 240 FGCAFLLDET TASFKWLFKS FLDSMGNRSP ITIFTDQDQA MSNAIEEVFS NTHHRLCLWH 300 ISKNAPSYFG ELNSNSEFQS LWNKCQKYCD SELEFQNTWD KMMHKFNLED HHWLNMMYKI 360 RHKWSTAFTK DSFTAEFKVS SRSESTNHVL NNIADTTISL TNFVIKYESV LAGMRSSEFN 420 EDFRCKQGAP QRAVKKSGIL GHAAQVYTCK IFRLFEYEFL NSLAIEWKQV DCQDTINVFE 480 VKEEDSERVC IVHFDHFNSN ISCSCKKFES LGILCCHALR VFNLKNLTKI PSQYILKRWT 540 KEAKKGMMAY EQDNHSSGDA KEAEIVWRNS MLCIANTIIS KSQGDDSLKS ICQKILLGLD 600 EKIERESSKL GSNANLEENE VVEHNITDEM LGLSNHVSIL NPPSEMGCVN VPFTTMLQGT 660 NVITQLSQQT LEQIQAALAT LLNQNPNRDD EERRDNRVRG APYRGPNQNR QQDYNEEDSE 720 DEEYAERVFG NHRGPAMNNG RDYQEQRDYR MKIELPSFNG NVSIEEYLDW VSEVEKFFDY 780 MGTVDDKQVC LVAYKLKGGA SAWWDRV

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MEEPNFQSNG GFSIRKGKPR YFNGTKNIRQ REFLCSKEGF RVDEDPCEEK NWNKLETRTG  60
CKAFIHFTVE NDVWRVTAFN PEHNHELALP SERHLLRSGC RISKPKAGLI DSMVNAGIST  120
KNTYLYLTEE VGGSENVGFT EKDCYNHVNT KKMSTISAGD AQSLLNHFKK RQIEDPMFFY  180
TVQVDQENRM TNFFWRDGRS RVDYDCFGDV VVFDTTYRTN RYNLTCAPFV GVNHHWQNVI  240
FGCAFLLDET TASFKWLFKS FLDSMGNRSP ITIFTDQDQA MSNAIEEVFS NTHHRLCLWH  300
ISKNAPSYFG ELNSNSEFQS LWNKCQKYCD SELEFQNTWD KMMHKFNLED HHWLNMMYKI  360
RHKWSTAFTK DSFTAEFKVS SRSESTNHVL NNIADTTISL TNFVIKYESV LAGMRSSEFN  420
EDFRCKQGAP QRAVKKSGIL GHAAQVYTCK IFRLFEYEFL NSLAIEWKQV DCQDTINVFE  480
VKEEDSERVC IVHFDHFNSN ISCSCKKFES LGILCCHALR VFNLKNLTKI PSQYILKRWT  540
KEAKKGMMAY EQDNHSSGDA KEAEIVWRNS MLCIANTIIS KSQGDDSLKS ICQKILLGLD  600
EKIERESSKL GSNANLEENE VVEHNITDEM LGLSNHVSIL NPPSEMGCVN VPFTTMLQGT  660
NVITQLSQQT LEQIQAALAT LLNQNPNRDD EERRDNRVRG APYRGPNQNR QQDYNEEDSE  720
DEEYAERVFG NHRGPAMNNG RDYQEQRDYR MKIELPSFNG NVSIEEYLDW VSEVEKFFDY  780
MGTVDDKQVC LVAYKLKGGA SAWWDRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein