PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023929230.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 418aa MW: 46484.1 Da PI: 7.4117

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023929230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.7e-34	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_023929230.1 46 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	65.8	7.9e-21	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_023929230.1 48 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 99 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MYHHHQHQGK NVHSSSRMSI PPERHLFLQG GNGPGDSGLV LSTDAKPRLK WTPDLHERFI 60 EAVNQLGGAD KATPKTVMKL MGIPGLTLYH LKSHLQKYRL SKNLHGQANS GVTKTGIAGL 120 GCDRVSEANG TTLDNLSIGP QTNKNLHMNE ALQMQLEVQR RLHEQLEVQR HLQLRIEAQG 180 KYLQSVLEKA QETLGRQNIG TVGLEAAKMQ LSELVSKVSN QCLNSAFSEL KELQGLCPPQ 240 QTQANQPNDC SMDSCLTSCE GSQRDQEIHN RGMGPYSGGA PLEQKEICED PMLQKTELRW 300 SDDLRDRMFH SSIGKDAERR MFPVERNSSN LSMSIGLGGE KGNGSNSYSA TRFKGRDSDD 360 CFPDRSNNRA ESVKLENEKI SQGYRIPYFS AKLDLNAHDE NDAAASCKQF DLNGFSWS

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MYHHHQHQGK NVHSSSRMSI PPERHLFLQG GNGPGDSGLV LSTDAKPRLK WTPDLHERFI  60
EAVNQLGGAD KATPKTVMKL MGIPGLTLYH LKSHLQKYRL SKNLHGQANS GVTKTGIAGL  120
GCDRVSEANG TTLDNLSIGP QTNKNLHMNE ALQMQLEVQR RLHEQLEVQR HLQLRIEAQG  180
KYLQSVLEKA QETLGRQNIG TVGLEAAKMQ LSELVSKVSN QCLNSAFSEL KELQGLCPPQ  240
QTQANQPNDC SMDSCLTSCE GSQRDQEIHN RGMGPYSGGA PLEQKEICED PMLQKTELRW  300
SDDLRDRMFH SSIGKDAERR MFPVERNSSN LSMSIGLGGE KGNGSNSYSA TRFKGRDSDD  360
CFPDRSNNRA ESVKLENEKI SQGYRIPYFS AKLDLNAHDE NDAAASCKQF DLNGFSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-164	G2-like family protein