PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023928746.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 332aa MW: 36262.7 Da PI: 6.5663

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023928746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116	5e-36	22	147	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssaseceaess 78 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++ + a+s XP_023928746.1 22 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELppwhptgtstgtaaepdpN--------AGSA 108 79**************************************************************9999887766443332221........2222 PP TCP 79 sssasnsssg............................k 89 + + +++s++ + XP_023928746.1 109 EMTIAEQSESsgynfqlhrqlgenpddnstfippsldsE 147 222222222222233333344444444444444444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MGMKSTGGEI VQVEGGHIVR STGRKDRHSK VYTAKGPRDR RVRLSAHTAI QFYDVQDRLG 60 YDRPSKAVDW LIKKAKSAID KLAELPPWHP TGTSTGTAAE PDPNAGSAEM TIAEQSESSG 120 YNFQLHRQLG ENPDDNSTFI PPSLDSEAIT DTMKSLFPTS SANSSINFQS YPPDLISRNS 180 NHPQDLGLSL HSFQDHSAPA DQNLFVGSAP MGFDTNYQRM VAWNNDTSAE NRGGFVFNSQ 240 ALSQQALLGQ GSAFSQRGPL QSSFAHSVRA WDHDLSIAST DHQKSQPIHH SSIFGSRFTT 300 DGLTGFCIPA RIQGEEEQNA NRPSSDSPNS HH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-80	TCP family protein