PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023928668.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

AP2

Protein Properties

Length: 426aa MW: 46796.3 Da PI: 8.4913

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023928668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	4e-17	70	129	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_023928668.1 70 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDEEEAAARAYDLAALKYWG 129 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MASSSSDPGL KSEAGGGGGG GGSSGEAAMV AKDELFVYRG GLKKAKKERG CTAKERISKM 60 PPCAAGKRSS IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DEEEAAARAY 120 DLAALKYWGP GTLINFPVTD YTRDLEEMQN VSREEYLASL RRKSSGFSRG ISKYRGLSSS 180 RWEPFGRMGA SEYFNSTHYG TGDDPAAESE YLGNFCSERK IDLTSYIKWW GPNKTRQSDA 240 ALKSSEETKH AGDIGVELKT LELAVQPTEP YQMPCLGMSN EMRKHKGSTV SALSILSRSA 300 AYKSMEEKAS KKPENSIDND ENEDKNTINK VDYGKAVEKS TSLDVASERL GVALGMSGGM 360 SLQRNAYPLT PFLSAPLLTN YNTVDPLADP ILWTSLVPVL PSGLSRTAEV TKTETSSTYT 420 FFHADE

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MASSSSDPGL KSEAGGGGGG GGSSGEAAMV AKDELFVYRG GLKKAKKERG CTAKERISKM  60
PPCAAGKRSS IYRGVTRHRW TGRYEAHLWD KSTWNQNQNK KGKQVYLGAY DEEEAAARAY  120
DLAALKYWGP GTLINFPVTD YTRDLEEMQN VSREEYLASL RRKSSGFSRG ISKYRGLSSS  180
RWEPFGRMGA SEYFNSTHYG TGDDPAAESE YLGNFCSERK IDLTSYIKWW GPNKTRQSDA  240
ALKSSEETKH AGDIGVELKT LELAVQPTEP YQMPCLGMSN EMRKHKGSTV SALSILSRSA  300
AYKSMEEKAS KKPENSIDND ENEDKNTINK VDYGKAVEKS TSLDVASERL GVALGMSGGM  360
SLQRNAYPLT PFLSAPLLTN YNTVDPLADP ILWTSLVPVL PSGLSRTAEV TKTETSSTYT  420
FFHADE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-162	AP2 family protein