PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023927718.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 558aa MW: 60601.5 Da PI: 7.5665

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023927718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.3e-09	370	417	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_023927718.1 370 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 417 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MEKENMTQPN WASSTFGMEI QPNELNYAPD QLTNCFFNPN WDNSVDQSDP FESALSSIVS 60 SPAASNAGAI PGGGGDGLMI RELIGRLGSI CNSGDISPQN YIAGHNNNNN STNTSCYSTP 120 LNSPPKLNLS MMDSQIRGNL PIPGNHPSLA PFSPDPGFAE RAARLSCFVS NTSFMGLNEN 180 EFPYRLMPRV ESGKLSRAAS NQSLKLATGS QMGVQKNNRS SPKEANLAAD KKLSRLSRSS 240 TPENAELGDS REGSSVSEQI PGGEVSNKVD TETNGRKRKS IPRGKAKETL SLTTPSAKDS 300 KAALDNDESN AKRSKQDENA GNEKDTAKGK AEPKTAGDVN QKQNKDNSKP PEAPKDYIHV 360 RARRGQATDS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKAVMLDEII NYVQSLQRQV 420 EFLSMKLSTV NPRMDLNMDA LLSKDIFQSR GALPHTLYPI DSAMPAFPFG YQHQQVPSLH 480 SGIANGTENQ FPVNSLNAAL RRSPSAQLSP IDGFGEATPD VSALWEDDLQ SVVQMAFGQN 540 KQQSFHGSRA AAQMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MEKENMTQPN WASSTFGMEI QPNELNYAPD QLTNCFFNPN WDNSVDQSDP FESALSSIVS  60
SPAASNAGAI PGGGGDGLMI RELIGRLGSI CNSGDISPQN YIAGHNNNNN STNTSCYSTP  120
LNSPPKLNLS MMDSQIRGNL PIPGNHPSLA PFSPDPGFAE RAARLSCFVS NTSFMGLNEN  180
EFPYRLMPRV ESGKLSRAAS NQSLKLATGS QMGVQKNNRS SPKEANLAAD KKLSRLSRSS  240
TPENAELGDS REGSSVSEQI PGGEVSNKVD TETNGRKRKS IPRGKAKETL SLTTPSAKDS  300
KAALDNDESN AKRSKQDENA GNEKDTAKGK AEPKTAGDVN QKQNKDNSKP PEAPKDYIHV  360
RARRGQATDS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKAVMLDEII NYVQSLQRQV  420
EFLSMKLSTV NPRMDLNMDA LLSKDIFQSR GALPHTLYPI DSAMPAFPFG YQHQQVPSLH  480
SGIANGTENQ FPVNSLNAAL RRSPSAQLSP IDGFGEATPD VSALWEDDLQ SVVQMAFGQN  540
KQQSFHGSRA AAQMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	8e-86	bHLH family protein