PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023927148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 287aa MW: 31779.4 Da PI: 10.4001 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 346 | 9.1e-106 | 1 | 286 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki.rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllal 84 md d+s + rn+gyyep++slk +lglqlmssi+e+ r++ + ++++a+++rd m++ +rd+++++ ++k++++ XP_023927148.1 1 MDGDNSLNmRNWGYYEPTTSLKGHLGLQLMSSIPEKPLIGgRNAAVMAGGNNGAFHHRDigvshstfpMDY-MRDAWINQ--------REKFINV 86 899999999*************************8876545777776778999*****************9.99****99........78999*9 PP GAGA_bind 85 llvenslasalpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkv 178 l++ n ++++vl++t+s++++q+ + +++ + r+e+++++ e++ ++ke+ kkrq ak+pk++k+kk+k+ ++++k + XP_023927148.1 87 LPTPN-------PNYSVLPETSSAHHMQM-----V-QQPPDlSRDERIIST----EETVVEKENGPIKKRQGAKSPKSPKEKKAKRAPRATKA-E 163 99766.......47899***********9.....3.333441344443333....345667888899999****************7777755.5 PP GAGA_bind 179 kkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLa 273 +++sa++ + a kk++++v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmS gafkk+LekLa XP_023927148.1 164 SSPSAPRARSAVKKTTEIVINGIDMDISGIPIPVCSCTGTPQQCYRWGSGGWQSACCTTNMSIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLA 258 555656778889*********************************************************************************** PP GAGA_bind 274 aeGydlsnpvDLkdhWAkHGtnkfvtir 301 aeGy++sn +DL++hWAkHGtnkfvtir XP_023927148.1 259 AEGYNFSNQIDLRTHWAKHGTNKFVTIR 286 ***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MDGDNSLNMR NWGYYEPTTS LKGHLGLQLM SSIPEKPLIG GRNAAVMAGG NNGAFHHRDI 60 GVSHSTFPMD YMRDAWINQR EKFINVLPTP NPNYSVLPET SSAHHMQMVQ QPPDLSRDER 120 IISTEETVVE KENGPIKKRQ GAKSPKSPKE KKAKRAPRAT KAESSPSAPR ARSAVKKTTE 180 IVINGIDMDI SGIPIPVCSC TGTPQQCYRW GSGGWQSACC TTNMSIYPLP MSTKRRGARI 240 AGRKMSIGAF KKVLEKLAAE GYNFSNQIDL RTHWAKHGTN KFVTIRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01930.1 | 2e-86 | BBR-BPC family protein |