PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023926889.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 326aa    MW: 35709 Da    PI: 9.1853
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023926889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-1266110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_023926889.1  66 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 110
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MVSKNPNPTE SFYLDPNGMA LPGLGPFATT TATNATTTTT TAASTTSSAE DLSKKIRKPY  60
TMTKSRESWT EPEHDKFLEA LQLFDRDWKK IEAFVGSKTV IQIRSHAQKY FLKVQKSGTS  120
EHLPPPRPKR KAAHPYPQKA SKNAPVLSQL SGSFQTSSGL LESGYVLSPD SPSMLRSPIT  180
SAGVSPWTKN TVQTVNVSHG TPGPTVANNS CSSTESAPRA QAIAESTDKG NHNHPLRVLP  240
DFSQVYRFIG SVFDPNASGH LQNLKKMDPI DVETVLLLMR NLSINLSSPD FEEHRRLLSS  300
YEIDTDTTNY GNAEKALFKD QPETVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-118MYB_related family protein