PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023925956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 236aa MW: 25886.7 Da PI: 10.5813 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 239.5 | 2.4e-73 | 40 | 236 | 106 | 301 |
GAGA_bind 106 ksidslqqlsepqledsavelreeeklealpieeaae..eakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvl 198 + ++ +q+ ep ++ +++ + + +++i++a++ +++++k++ k+ +++ k+ + k++kk+++ + kk+k +s++e ++++k i++ + XP_023925956.1 40 NPLQGSQMNPEPGIAVTPIRTIPATTEPKKNINSATKpaKVRKQKNSMKEPNQTASKVCRPKQAKKTPS-TSKKTKGQSMPEAKREKKIPINIDM 133 445555555555565556554444444444444444400444444444445555566666666666444.44555555555667777779***** PP GAGA_bind 199 ngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHG 293 ++ ++D s++P+P CsCtG +r CYkWG+GGWqS+CCt+++S yPLP+s++r+g+R+agrKmS+ga+ klL +La+eG+dl +pvDLkdhWA+HG XP_023925956.1 134 DKTDFDFSGVPPPYCSCTGNPRACYKWGAGGWQSSCCTINVSEYPLPMSSTRPGSRMAGRKMSNGAYGKLLLRLATEGHDLTHPVDLKDHWARHG 228 *********************************************************************************************** PP GAGA_bind 294 tnkfvtir 301 tnkfv i+ XP_023925956.1 229 TNKFVIIK 236 *****998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGTYTNRNPM IPEATAGASV PHFTWFYPGS FMSASKSNSN PLQGSQMNPE PGIAVTPIRT 60 IPATTEPKKN INSATKPAKV RKQKNSMKEP NQTASKVCRP KQAKKTPSTS KKTKGQSMPE 120 AKREKKIPIN IDMDKTDFDF SGVPPPYCSC TGNPRACYKW GAGGWQSSCC TINVSEYPLP 180 MSSTRPGSRM AGRKMSNGAY GKLLLRLATE GHDLTHPVDL KDHWARHGTN KFVIIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35550.3 | 2e-64 | BBR-BPC family protein |