PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023925304.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 410aa    MW: 43636.8 Da    PI: 8.0743
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023925304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.4e-11344389655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++Ik Lq
  XP_023925304.1 344 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 389
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MYPSSSPSSS SQKPMGPTPP TTTTGLTRYG SAPGSLLTTA VDSIMGQTGH EFSALRSTPP  60
PPQPPSFMAP QQQQQQQQHH HHHHHNSHSH SHPYFSSDSS SITNESTCKV NSSNDPNKDH  120
HKGGGGGGLQ RSYGLNEMPS FGDFTSNLKI GGGGGDGGLS SSSSSSCSSS SSASASALVR  180
QRSSPAGFLS HLASDNGFSV TRGSGGYASQ GGSNGGHGVS RLKSQLSFTR QDSLSQISEV  240
SEDVVDGISS DNGHQNASHS YATSNFGMDS WDNTNSIMFS APPSKRAKNL DGDIYNCLNS  300
LETQFSLPQT TLEMATVEKL LHIPEDSVPC KIRAKRGCAT HPRSIAERER RTRISGKLKK  360
LQDLVPNMDK QTSYADMLDL AVQHIKGLQN QVQKLRKDLD GCTCGCNQTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.16e-80bHLH family protein