PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023925293.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 497aa MW: 56148.5 Da PI: 6.4

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023925293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	132.7	2.6e-41	15	140	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p+G+rF Ptdeelv++yL+ k++g+k + ++i ev+i+k+eP +Lp + vk ++ew+fF+ r+ + +r+nratk+gyWk+tg+d+++ + XP_023925293.1 15 PVGYRFYPTDEELVSYYLRLKMQGDKEYEVRAIGEVNICKYEPCELPglSVVKPVDHEWFFFCAREIN---RSRANRATKRGYWKSTGRDRNIRV 106 89********************99766699***********6336667889***9875...67*****************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyr 127 k +++++g+kktLvf++gr p+g++t+W++hey+ XP_023925293.1 107 KgTNNVIGTKKTLVFHEGRVPNGRRTSWLIHEYQ 140 967778*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MTSMTYSETG LDSIPVGYRF YPTDEELVSY YLRLKMQGDK EYEVRAIGEV NICKYEPCEL 60 PGLSVVKPVD HEWFFFCARE INRSRANRAT KRGYWKSTGR DRNIRVKGTN NVIGTKKTLV 120 FHEGRVPNGR RTSWLIHEYQ PATFPPHQKA FVLCRLFKKA DVRTNGAPCH DGDVSSYAAS 180 DFEGQVPGHT IPEIHEFNQV DAGLASVHQH QRQDYDIASS LQLEEYNQQE PPDLDPTLPD 240 DFDYDVMKYL SDDNEQEEYT LEAVRQSNDS RAPDSPITIY YDGGGLCSDS DTDTAQAPHQ 300 QMHMINSGTA SLSNRGQYKE KRNGVVLDDF LGLDSSPVNS AAYIPCVRST QSQGLRSPQS 360 IGAFSLQYQQ SSHHSEVQRA APRKFQLQSS SLKVESLEKA KDASRLSITT NLPQKERSII 420 ESDKEQKMAQ GTNADNSPKS KKVRSAGSDR KGSLIFQETS QQGHESSPPS VYFVKFLIGI 480 ILFLVFIREM LLYGNWY

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MTSMTYSETG LDSIPVGYRF YPTDEELVSY YLRLKMQGDK EYEVRAIGEV NICKYEPCEL  60
PGLSVVKPVD HEWFFFCARE INRSRANRAT KRGYWKSTGR DRNIRVKGTN NVIGTKKTLV  120
FHEGRVPNGR RTSWLIHEYQ PATFPPHQKA FVLCRLFKKA DVRTNGAPCH DGDVSSYAAS  180
DFEGQVPGHT IPEIHEFNQV DAGLASVHQH QRQDYDIASS LQLEEYNQQE PPDLDPTLPD  240
DFDYDVMKYL SDDNEQEEYT LEAVRQSNDS RAPDSPITIY YDGGGLCSDS DTDTAQAPHQ  300
QMHMINSGTA SLSNRGQYKE KRNGVVLDDF LGLDSSPVNS AAYIPCVRST QSQGLRSPQS  360
IGAFSLQYQQ SSHHSEVQRA APRKFQLQSS SLKVESLEKA KDASRLSITT NLPQKERSII  420
ESDKEQKMAQ GTNADNSPKS KKVRSAGSDR KGSLIFQETS QQGHESSPPS VYFVKFLIGI  480
ILFLVFIREM LLYGNWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	4e-55	NAC family protein