PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023924462.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 315aa MW: 36912.1 Da PI: 7.5605

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023924462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	81.8	1e-25	134	229	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 ++ws++D++ lLq l ++++++ + +++d++ fy+ +kk + kv++ q+ +K+r+LKkKfk++ +k +gk +sfs+ h+++ +elsk XP_023924462.1 134 TTMVWSKNDNLNLLQSLYKYAENKRAdpvAATADMNSFYNSFKKTFHCKVTRLQVADKVRKLKKKFKDNLEK--KGKTFSFSNLHEKNLYELSKN 226 579***************9999994444556***********************************..***************** PP DUF573 95 iWg 97 iWg XP_023924462.1 227 IWG 229 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MGEERKKKKM KKWRREEEEW QPATCDDTHH QDPDHDSSND SSYHEDEESP NSSESSFKPE 60 ELEEAKAEAK SNEYCYDDEL NEYLAMSSPS SAEIEYHPEE LDSSRKRSIK KEAIEDSNYN 120 SEDNGKNKKK KTTTTMVWSK NDNLNLLQSL YKYAENKRAD PVAATADMNS FYNSFKKTFH 180 CKVTRLQVAD KVRKLKKKFK DNLEKKGKTF SFSNLHEKNL YELSKNIWGL QKDSRETKCV 240 VNKKLKFDFE GHGMEAFVKK RGLSVSCFKD TKKKTSLKEK WNEFKFSELE TTRRQAAFER 300 ELYELALDEL PSGSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	4e-06	GeBP family protein