PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023923382.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 896aa MW: 102321 Da PI: 4.9128

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023923382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	853	874	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C C sF++k +L++Hi+ H XP_023923382.1 853 TCATCQASFPSKTQLHQHIKDH 874 7******************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 896 aa Download sequence
MGASQSTDRD TTASSGLKTS YYELLGLQRQ ATEDEIKKAY RRKALELHPD RNYGNEETAT 60 KVFAEVQAAY EVLSDPQERA WYDSHETAIL RGDDDVGGED GVPTYENVRA TTADDLARMV 120 RKFNSNVEFS DAPSGFFGFL REAFEGLAKE EAIAANWEGT EAPDYPSFGH KDDAYDDVVK 180 RFYAAWSSFS TVKNFAWKDK YRLSEAPDRW YRRRMEQENK KFRQDGVREF NDAVRSLVAF 240 VRKRDPRYVP STQTEEERQK TLRDAAAAQA ARARAANEAK WNQEVPEWTK TRDPEELEES 300 SEEEVEIHIF ECVACNKEFK SERQWEAHEK SKKHQKALYA LRKKMRKENA NLDLDDHTAS 360 SGLKTSYYEL LGLQRQATED EIKKAYRRKA LELHPDRNYG NEETATKVFA EVQAAYEVLS 420 DPQERAWYDS HETAILRGDD DVGGEDGVPT YENVRATTAD DLARMVRKFN SNVEFSDAPS 480 GFFGFLREAF EGLAKEEAIA ANWEGTEAPD YPSFGHKDDA YDDVVKRFYA AWSSFSTVKN 540 FAWKDKYRLS EAPDRWYRRR MEQENKKFRQ DGVREFNDAV RSLVAFVRKR DPRYVPSTQT 600 EEERQKTLRD AAAAQAARAR AANEAKWNQE VPEWTKTRDP EELEESSEEE VEIHIFECVA 660 CNKEFKSERQ WEAHEKSKKH QKALYALRKK MRKENANLDL DDHTGNGVTT PIVDEYEEGE 720 SPEVISISNE DTYLDEKDGF DRLESDAEEQ DGQSSVEQTK GEAFQEADQL SEHDARSTSE 780 SEADDEYASP EKIQARLQNI SLNEAPRTAN SENDDDDNSH PAATQPKMGK AAQKRAKRAA 840 AAASSQNQEA SQTCATCQAS FPSKTQLHQH IKDHGHATLK TVGTASSAKG KKKGKR

Sequence ? help Back to Top

Protein Sequence Length: 896 aa Download sequence

MGASQSTDRD TTASSGLKTS YYELLGLQRQ ATEDEIKKAY RRKALELHPD RNYGNEETAT  60
KVFAEVQAAY EVLSDPQERA WYDSHETAIL RGDDDVGGED GVPTYENVRA TTADDLARMV  120
RKFNSNVEFS DAPSGFFGFL REAFEGLAKE EAIAANWEGT EAPDYPSFGH KDDAYDDVVK  180
RFYAAWSSFS TVKNFAWKDK YRLSEAPDRW YRRRMEQENK KFRQDGVREF NDAVRSLVAF  240
VRKRDPRYVP STQTEEERQK TLRDAAAAQA ARARAANEAK WNQEVPEWTK TRDPEELEES  300
SEEEVEIHIF ECVACNKEFK SERQWEAHEK SKKHQKALYA LRKKMRKENA NLDLDDHTAS  360
SGLKTSYYEL LGLQRQATED EIKKAYRRKA LELHPDRNYG NEETATKVFA EVQAAYEVLS  420
DPQERAWYDS HETAILRGDD DVGGEDGVPT YENVRATTAD DLARMVRKFN SNVEFSDAPS  480
GFFGFLREAF EGLAKEEAIA ANWEGTEAPD YPSFGHKDDA YDDVVKRFYA AWSSFSTVKN  540
FAWKDKYRLS EAPDRWYRRR MEQENKKFRQ DGVREFNDAV RSLVAFVRKR DPRYVPSTQT  600
EEERQKTLRD AAAAQAARAR AANEAKWNQE VPEWTKTRDP EELEESSEEE VEIHIFECVA  660
CNKEFKSERQ WEAHEKSKKH QKALYALRKK MRKENANLDL DDHTGNGVTT PIVDEYEEGE  720
SPEVISISNE DTYLDEKDGF DRLESDAEEQ DGQSSVEQTK GEAFQEADQL SEHDARSTSE  780
SEADDEYASP EKIQARLQNI SLNEAPRTAN SENDDDDNSH PAATQPKMGK AAQKRAKRAA  840
AAASSQNQEA SQTCATCQAS FPSKTQLHQH IKDHGHATLK TVGTASSAKG KKKGKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	2e-43	C2H2 family protein