PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023923268.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 317aa MW: 34220 Da PI: 7.9912

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023923268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.5	1.4e-39	66	150	2	85
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a++s+s++++s XP_023923268.1 66 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALaAAGASVSQQGTS 150 789******************************************************************9996555555555432 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MDPKGSTAKQ PPQGVPNFLS LPQPQHHQQQ QQEQEEEPNM GENKPAEIKD FQIVIADKEE 60 GKKQLAPKRS SNKDRHTKVE GRGRRIRMPA LCAARIFQLT RELGHKSDGE TIQWLLQQAE 120 PSIIAATGTG TIPASALAAA GASVSQQGTS LSAGLHQKID ELGGSSIGSG SRTSWPMVGA 180 NLGRPHVASA LWPPVTGFGF QSSSGPSTTN LPTESSNYLQ KIGFSGFDLP PTNMGPMSFT 240 SILGGSNQQL PGLELGLSQD GHIGVLNPQA LSQIYQQMGQ ARVHQQQQQQ HQQHQHQHQH 300 QHQHQPPTKD DSQGSGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-82	TCP family protein