PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922366.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YA
Protein Properties Length: 337aa    MW: 36987.1 Da    PI: 7.2623
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.71.7e-32166222158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF
  XP_023922366.1 166 QEPVYVNAKQYQGILRRRQARAKAELEKKL-IKVRKPYLHESRHQHAMRRERGTGGRF 222
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MQSKSENGNR LEPDSHAIPP TSVYPEPWYH AMTRGNISNS SSFECPNGGS ESNDGQSYSN  60
GRLNGEDDDG TKESQNTASS RSAGNNGQEQ QNVQHVASNA PSRRDECLTQ PPQLELVGHS  120
IACASNPYQD QFYGGMIAAY GHQPYGYPPF LGMPHARMPL PLEMAQEPVY VNAKQYQGIL  180
RRRQARAKAE LEKKLIKVRK PYLHESRHQH AMRRERGTGG RFAKKTAAED ANYEAKEKGT  240
GSGPTLSSQS ASSSGSEPLL TDSAETWNSS HGQPEGRHNA PEAHNYVNGS VHYQNHNSLQ  300
ASSYLHASER GEEGDRPGQQ WGSISSNQAS QRRLAIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-83NF-YA family protein