PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023922184.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 968aa MW: 108001 Da PI: 7.548

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023922184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.3	3.4e-07	4	24	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cg+sF+r ++L+rHi tH XP_023922184.1 4 CTYCGQSFTRDEHLERHILTH 24 *******************99 PP
2	zf-C2H2	15.6	4.7e-05	30	52	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C++sF r+++L+rH +H XP_023922184.1 30 FKCFTCHMSFARRDLLQRHYTVH 52 89*****************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 968 aa Download sequence
MVFCTYCGQS FTRDEHLERH ILTHTNVKPF KCFTCHMSFA RRDLLQRHYT VHGKNENQEP 60 IPAVNGMIPK SAGRTPIACN NCAKTKTKCD KKFPCSRCAS RSLKCTLRPT RRSTKNVQRM 120 GVPMDGAVAM PAHIHPAPVD GALSSSPPQP KPLKPAMSKK TPDDTQQQPP PTPVLDVSPT 180 QVAEKPTSQL KPGSNGKSPR LQTSGSLAQT TPVSVYSDFN GANVEDSDSS SSPRFMLDWT 240 HMQMPIGYAG IVQPSMVMDN DVPFDPTIMH VQQSVSLPGP AMPQMVNDMT SLITPIESPA 300 IDRASSDRDF GSAAVSFRQQ RNRSMISTAD LNSDVAPIIA AQDSWSVFKC TPIVPATSCP 360 KTARLNLELL EQTLRNHEGW STWTPPWDES DLTVDDCLTV MQLHESTRDK LLAITQGFLY 420 KALEIHRQGS PIQQSSTGLH TPSSHTGFNF VLLPPARVLE FFLRSYALSF ERYFPLTSRG 480 ILDANELMHC YNDRAASLLV LMMIAQGAVS VPSREACMLT AGFAEACRIS LFDLIEKDII 540 MSGDPIVLHA ALLFTVQAAW SGDKWQMDIA MGQRGMYFAM LRHSGVLDDV PSIPPPRDQP 600 PNTDFLWSEW IQNESKSRLV YSWVMVDQDL ALFHDTAPLF SVTEFCVPMP DTDRLWNART 660 AAEWSSTFEQ VHEFAGGFSS VGSGARPLSL RELFRRFLND EVTTRKIEMT PMHLRLLLHP 720 LQSQVCQYRQ LLGCFSDIQP TGPPAGRAMS AASTRARFDE VMALCQRWFT LAEQYLKANP 780 MCTMMQTNLI MFHLISLNSV TTFPEVERLA RRENFDGSYT QLLWAHHRCL HAPEEAIFHC 840 GQVLRLVRSM PRAVRPPWWA GAIYRAGLIL WADSLVSKEV SAPSNNGGMY PVPGPSFAID 900 ALPADHPLIV RYLNKHEGVP CVTRRDGSQM TIDHSFKVLH HCIEVIDEGI STRFSGGIRA 960 KLEFLART

Sequence ? help Back to Top

Protein Sequence Length: 968 aa Download sequence

MVFCTYCGQS FTRDEHLERH ILTHTNVKPF KCFTCHMSFA RRDLLQRHYT VHGKNENQEP  60
IPAVNGMIPK SAGRTPIACN NCAKTKTKCD KKFPCSRCAS RSLKCTLRPT RRSTKNVQRM  120
GVPMDGAVAM PAHIHPAPVD GALSSSPPQP KPLKPAMSKK TPDDTQQQPP PTPVLDVSPT  180
QVAEKPTSQL KPGSNGKSPR LQTSGSLAQT TPVSVYSDFN GANVEDSDSS SSPRFMLDWT  240
HMQMPIGYAG IVQPSMVMDN DVPFDPTIMH VQQSVSLPGP AMPQMVNDMT SLITPIESPA  300
IDRASSDRDF GSAAVSFRQQ RNRSMISTAD LNSDVAPIIA AQDSWSVFKC TPIVPATSCP  360
KTARLNLELL EQTLRNHEGW STWTPPWDES DLTVDDCLTV MQLHESTRDK LLAITQGFLY  420
KALEIHRQGS PIQQSSTGLH TPSSHTGFNF VLLPPARVLE FFLRSYALSF ERYFPLTSRG  480
ILDANELMHC YNDRAASLLV LMMIAQGAVS VPSREACMLT AGFAEACRIS LFDLIEKDII  540
MSGDPIVLHA ALLFTVQAAW SGDKWQMDIA MGQRGMYFAM LRHSGVLDDV PSIPPPRDQP  600
PNTDFLWSEW IQNESKSRLV YSWVMVDQDL ALFHDTAPLF SVTEFCVPMP DTDRLWNART  660
AAEWSSTFEQ VHEFAGGFSS VGSGARPLSL RELFRRFLND EVTTRKIEMT PMHLRLLLHP  720
LQSQVCQYRQ LLGCFSDIQP TGPPAGRAMS AASTRARFDE VMALCQRWFT LAEQYLKANP  780
MCTMMQTNLI MFHLISLNSV TTFPEVERLA RRENFDGSYT QLLWAHHRCL HAPEEAIFHC  840
GQVLRLVRSM PRAVRPPWWA GAIYRAGLIL WADSLVSKEV SAPSNNGGMY PVPGPSFAID  900
ALPADHPLIV RYLNKHEGVP CVTRRDGSQM TIDHSFKVLH HCIEVIDEGI STRFSGGIRA  960
KLEFLART