PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921570.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 171aa    MW: 19294.6 Da    PI: 10.211
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.0008590112123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F     L  H+r+H
  XP_023921570.1  90 HECSICGLEFAMGQALGGHMRRH 112
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MTMKRMREDG GIESLDMANC LMLLSHSLET KPRKTSRADV FECKTCNRQF PSFQALGGHR  60
SASHKRPKLM GEELKERTKT QNLGNKPKMH ECSICGLEFA MGQALGGHMR RHRAMMDGAF  120
SPATIEKNVP VLKRSNSTRV MCLDLNLTPL ENDLKLLFGK KAPQIDFTLM I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.15e-45C2H2 family protein