PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921235.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SBP
Protein Properties Length: 135aa    MW: 15456.8 Da    PI: 6.7091
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP135.81.3e-4250127178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+e+C++dl++ak+yhrrhkvC++h+kapvv v+g++qrfCqqCsrfh+l+efDe+krsCrrrLa+hnerrrk+++
  XP_023921235.1  50 TCQAEDCNVDLTDAKHYHRRHKVCDFHAKAPVVSVAGIQQRFCQQCSRFHQLTEFDESKRSCRRRLAGHNERRRKSSS 127
                     6**************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MEDEDEDEDD DEYTNNELGS GEEERRKRMM TPSPSTKKGS GSGGGSTPPT CQAEDCNVDL  60
TDAKHYHRRH KVCDFHAKAP VVSVAGIQQR FCQQCSRFHQ LTEFDESKRS CRRRLAGHNE  120
RRRKSSSEFH REGSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.15e-40SBP family protein