PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023921041.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Trihelix

Protein Properties

Length: 274aa MW: 30930.8 Da PI: 9.8676

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023921041.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.6	1.9e-14	28	125	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrt.....sessstcpyfd 83 +W+++ +++Liea ++ +l+rg+l++ +W+ev++++ ++ + rs +qCk++++ l+k+yk +k+ + + + + +s +p+f XP_023921041.1 28 CWSEDATHTLIEAWGDRYLDLNRGNLRQRHWQEVAAAVnarhattASSKSFRSDIQCKNRIDTLKKKYKIEKAKATDFNsttaaAAYVSAWPFFA 122 7*************************************99999888999****************99988776530111244567888888 PP trihelix 84 qle 86 +l+ XP_023921041.1 123 SLD 125 886 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MESPSPSPSP SPSPPRPSTQ TPALREDCWS EDATHTLIEA WGDRYLDLNR GNLRQRHWQE 60 VAAAVNARHA TTASSKSFRS DIQCKNRIDT LKKKYKIEKA KATDFNSTTA AAAYVSAWPF 120 FASLDSLLGS SFPKPSTAAP RRSTHPWNLS TPIPVGRRTH KRPAPSPAID SFFRRNFTAA 180 AAAEEDCDGS DSSSKEEKEV GKIGYRELAQ AIERFGEIYE RVEGAKQKQM MELEKQRMQF 240 TKDLECHRMQ LLLETQVQLL KIKRARRQCQ NGYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	1e-60	Trihelix family protein