PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023920160.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 703aa MW: 76121.6 Da PI: 7.4097

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023920160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	402	434	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gLt +qV++WF N R + XP_023920160.1 402 HPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 434 89*****************************88 PP
2	BELL	125	2.8e-40	261	332	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eVd+rY+qy++q+q+vissFe++aglgsa+ Yt+lAl++iS++FrcLkdai++qi XP_023920160.1 261 ERQEIQMKKAKLINMLDEVDQRYRQYHNQMQIVISSFEQAAGLGSARTYTALALQTISKQFRCLKDAITGQI 332 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MATYFHGNSE IQAADGLQTL VLMNRGYVQY SDTPPPPPQS QSNNFVFLNS AAAAAAANSL 60 NLPHAPPPHT QQFVGIPLSN AGSAGDPTSQ SMHAAHHEFS ALHGFAPRMQ YNLWNSIDPN 120 TAARETPRAQ QGLSLSLSSQ QPTGGGYGSF RSDRDVPPQA QGPAISGEEH MRVSAGGSPS 180 SASGVTNGVS GIQSVLLSSK YLKAAQDLLD EVVNVGNGIK SEISKKLNGK IIGESSVAVS 240 GDGSVGGEGS GKRAAELSTA ERQEIQMKKA KLINMLDEVD QRYRQYHNQM QIVISSFEQA 300 AGLGSARTYT ALALQTISKQ FRCLKDAITG QIRAANKSLG EEDCLGGKIE GSRLKYVDHH 360 LRQQRALQQL GMIQHNAWRP QRGLPERSVS VLRAWLFDHF LHPYPKDSDK HMLAKQTGLT 420 RSQVSNWFIN ARVRLWKPMV EEMYLEDLKE QEQNGSEDKS SKSNDDSASK SSAPQEKSSA 480 AENQTRSFNS KQENSTNQNG AAIAISKAST SPVGGNMRNH SGFTLIGSSE LEGITQGSPK 540 KPRSNDMLHS PNSVPSINMD VNMDIKPNEA NNEQVSMKFG DERQSRDGYS FMGSQTNFIG 600 GFGQYPIGEI GRFDAEQFAP RFSGNGVSLT LGLPHCENLS LSGTHHTFLP NQSIQLGRRV 660 DIGEPNEFGA INTSTPHSSA AYESINIQNP KRFAAQLLPD FVA

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MATYFHGNSE IQAADGLQTL VLMNRGYVQY SDTPPPPPQS QSNNFVFLNS AAAAAAANSL  60
NLPHAPPPHT QQFVGIPLSN AGSAGDPTSQ SMHAAHHEFS ALHGFAPRMQ YNLWNSIDPN  120
TAARETPRAQ QGLSLSLSSQ QPTGGGYGSF RSDRDVPPQA QGPAISGEEH MRVSAGGSPS  180
SASGVTNGVS GIQSVLLSSK YLKAAQDLLD EVVNVGNGIK SEISKKLNGK IIGESSVAVS  240
GDGSVGGEGS GKRAAELSTA ERQEIQMKKA KLINMLDEVD QRYRQYHNQM QIVISSFEQA  300
AGLGSARTYT ALALQTISKQ FRCLKDAITG QIRAANKSLG EEDCLGGKIE GSRLKYVDHH  360
LRQQRALQQL GMIQHNAWRP QRGLPERSVS VLRAWLFDHF LHPYPKDSDK HMLAKQTGLT  420
RSQVSNWFIN ARVRLWKPMV EEMYLEDLKE QEQNGSEDKS SKSNDDSASK SSAPQEKSSA  480
AENQTRSFNS KQENSTNQNG AAIAISKAST SPVGGNMRNH SGFTLIGSSE LEGITQGSPK  540
KPRSNDMLHS PNSVPSINMD VNMDIKPNEA NNEQVSMKFG DERQSRDGYS FMGSQTNFIG  600
GFGQYPIGEI GRFDAEQFAP RFSGNGVSLT LGLPHCENLS LSGTHHTFLP NQSIQLGRRV  660
DIGEPNEFGA INTSTPHSSA AYESINIQNP KRFAAQLLPD FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-162	TALE family protein