PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919537.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 220aa    MW: 24818.9 Da    PI: 10.1785
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC25.62.6e-081141751172
           NF-YC  11 ekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrr 72 
                      ++++ k h++P+ rik il++++   +i+ ea  l+ ka e f+ e+t  +   + + +++
  XP_023919537.1 114 VDKEEAKTHRFPMNRIKTILRSQDSDLRITHEALFLVNKATEKFLEEFTKDAHACCVQDHKK 175
                     45678899**************999999*******************998877666555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MASSKKSTTE EQKSKETKPK NTPKKKNKTT STTKGNPEKN NNNNNKKVSN GTVSDSSSDV  60
IIIPSSSIES GQDEKQKPDK SSGANKRTAD ADTKSKKHKQ KKQKRQEEDV NDVVDKEEAK  120
THRFPMNRIK TILRSQDSDL RITHEALFLV NKATEKFLEE FTKDAHACCV QDHKKSLAYK  180
HLCTSMLPLC KRFENFVPEK LKAKDALAER KIAETENEAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.12e-22NF-YC family protein