PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919191.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family E2F/DP
Protein Properties Length: 309aa    MW: 34864.6 Da    PI: 8.211
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919191.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP70.22.4e-2274152471
         E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse..............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      +Lr+++     +++k ++  ++t+n+va+e++++              d+kn+rRR+YD+lNVL+a+++i++ +k+ei wkg
  XP_023919191.1  74 GGLRQFSVI---VCQKLQSkVRTTYNQVADEIIADfagtqsdtvvplesDEKNIRRRVYDALNVLMAMDIIAR-DKKEIWWKG 152
                     589999999...****999899***************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDYRYLRYIF GGSNQKMSSG GVPGGAPTKI INVGASCKSN HGMNHTASHQ ENACNNAVVE  60
RAAKKKRESR IIGGGLRQFS VIVCQKLQSK VRTTYNQVAD EIIADFAGTQ SDTVVPLESD  120
EKNIRRRVYD ALNVLMAMDI IARDKKEIWW KGLPETNMKD LEELKALRVE MMNRIGKKVA  180
YMKDIEEQIV GLQNLMARNR QLLECGSASP EGRFSLPFLL VQTTPHATVE IEISEDMQLV  240
HFDFNSSPFS LHDDAYVLKM MRYNQQPECR DVSPSSFVQS SSSSGTSQGT KPFHWNSETH  300
SEMNIYWKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-89E2F/DP family protein