PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918641.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 249aa    MW: 28731.9 Da    PI: 7.4337
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.59.5e-2879170289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +Y++YAk++GF +r+ + ++s r+g++++r+f C+keg+r +++k+    + + r++r+ tr gCka+++v+kek+gkw+vtkle++HnH++
  XP_023918641.1  79 YYDAYAKRLGFIIRVGNCHRSGREGSVISRRFLCNKEGFRVNNNKTrntrSLEVRKPRQITREGCKAMIMVRKEKTGKWVVTKLETKHNHPM 170
                     8***************************************9999997776667789**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MKAGNTEEAY QEKEYMMELD VDLGSKIVEC SIGREICVTE AGEMLDLYEG RELGIHEIDI  60
NVQPYVEMEF ESEEAAMMYY DAYAKRLGFI IRVGNCHRSG REGSVISRRF LCNKEGFRVN  120
NNKTRNTRSL EVRKPRQITR EGCKAMIMVR KEKTGKWVVT KLETKHNHPM GISVGKGRRC  180
TVQARPQDEK DKKIRELSTE LGRANQQIAQ CEEQLKIILK YIEQHANHLT KSVQEIVENV  240
KEVEAMGQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-44FAR1 family protein