PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918306.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 373aa    MW: 41540 Da    PI: 6.8167
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17251285135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_023918306.1 251 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 285
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MEAPEYQSGF CTQFVTEKRH SIDNKAAGGG DHFMVEDLLD FSNDDDAIIA DTPFEAATTT  60
TAAGNSTDSS TVTVVDSCNS SSFSGCDPNF VSDICRNFPD ANFSSDLCVP YDDLAELEWL  120
SNFVEESFSS EDLQKLQMIS GMKARTVDET SETTPQHEPS NRNSNSPIFR PEMSVPAKAR  180
SKRSRAAPCN WTSRLLVLSQ QSPTSSPSTP QQQLSLPPSD PDIAVAKKTV KVAAYSKKKD  240
GVDSGGDGRK CLHCATDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR PAASPTFMLT  300
KHSNSHRKVL ELRRQKEMMR THHHHHHHQQ HQHQHQQQQF LHHHHQNLVF DVANGGDDYL  360
IHSHVGPDFR QLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-64GATA family protein