PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917830.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 1471aa MW: 164453 Da PI: 9.0402

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	1380	1403	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +Cp Cgk F ++ +L++H r+H XP_023917830.1 1380 VCPvkGCGKKFFSHKYLVQHRRVH 1403 69999*****************99 PP
2	zf-C2H2	12.5	0.00043	1439	1465	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H XP_023917830.1 1439 YVCGepGCGQTFRFVSDFSRHKRKtgH 1465 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1471 aa Download sequence
MAASEAAQEV VLSWLKTLPL APEYHPTLSE FQDPISYIFK IEKEASKYGI CKIVPPVPPS 60 PKKTAISNLN RSLLARNPDS DPKSAPTFTT RQQQIGFCPR KPRPVQRPVW QSGEWYTFQE 120 FEAKAKAFEK AYLKKCGGGS GGGNGNGKKT TPLSALEIET LYWKATVDKP FRVEYANDMP 180 GSAFVPLNAK KSKISSSSEG VSLGETAWNM RGVSRANGSL LKFMKEEIPG VTSPMVYVAM 240 MFSWFAWHVE DHDLHSLNYL HMGAGKTWYG VPREAAVAFE EVVRVHGYGG EINPLVTFAT 300 LGEKTTVMSP EVFISAGVPC CRLVQNAGEF VVTFPRAYHT GFSHGFNCGE AANIATPEWL 360 RVAKDAAIRR ASINYPPMVS HFQLLYDLAL ALHSRMPMGN NAGPRSSRLK DKKKGEGETV 420 VKELFAQNVV QNNELLHILG KGSSIVLLPR SSSDISVCSK LRVGSQLRVN PTLTPGLCSS 480 KEANPGIGQV KNFLPVKGKF GSFYERFDNI CSSNSKTLNT DSERGSTAQG DGLSDQRLFS 540 CVTCGILSFA CVAIVQPRDA ASRYLMTADC SFLNDWTVGS GITGNGFAIA NGDAITSDQN 600 THPGWKEKSI PDGLFDVPVQ SHDGQRQMED QRYEVVSNTE TQREPSALGL LAMTYGNSSD 660 SEDDQGEPDF PACAEQKKLT NSSSESIYQC DNSGLPSMQD CPQGATGVRS PSLSRHGVED 720 GSNQTSDCSA EFRTDDPASR RSDGLMDTFS DPITVSHVSS DCSLDVHDVD QTKFGKENVP 780 RENKNMPFAP RSDEDSSRMH VFCLEHAKEV EKQLRRIGGV HILLLCHPDY PKIVDDAKSL 840 AEEMGIDYPW NNITFRDATK EDEDRIRSAL DSQEAIPGNG DWAVKLGINL FYSANLSRSP 900 LYSKQMPYNS VIYNAFGRCS PASSPKKAKV YRRRSGRQRK VVAGKWCGKV WMSHQVHPFL 960 AKGDSDDEEE EDMSFQTWTM PDEKFEIKSE STHKSETTMV ARKYGRKRKM TVESGSAKKA 1020 KFIDRGDAFF DYSVEDNSHQ QGRTPRGKLA KSVERDEAVS DDSLDNYSHE LQRTSKSKEA 1080 FFDEREDAVS DDSLMDDSHQ QHRRIHRGKQ SKCFDKEDAV SDSSLGHNFH QHNRRIVKSK 1140 IGREAFSDDS LEGNSHQQIK RYNRRNQAKC IEREDAVLDD SLGVNSHKQH RRLPNIKQAT 1200 SIEREDAVSD VPLDDDSHQQ HRRILRNKPM RVEISQPMKK GPPRRVKKGT SWSTKQVTHR 1260 PIKKESPQLM KQQTPRLRNN QSERNSSHIG LLVEEDQEGG PSTRLRKRTK KTVKESEAKP 1320 KAKKQASRIK VRKNASAVKA PAGHNDPKIG DGEVEFLCDI EGCTMSFGSK HELVLHKRNV 1380 CPVKGCGKKF FSHKYLVQHR RVHLDERPLR CPWKGCKMTF KWAWARTEHI RVHTGARPYV 1440 CGEPGCGQTF RFVSDFSRHK RKTGHSAKKG R

Sequence ? help Back to Top

Protein Sequence Length: 1471 aa Download sequence

MAASEAAQEV VLSWLKTLPL APEYHPTLSE FQDPISYIFK IEKEASKYGI CKIVPPVPPS  60
PKKTAISNLN RSLLARNPDS DPKSAPTFTT RQQQIGFCPR KPRPVQRPVW QSGEWYTFQE  120
FEAKAKAFEK AYLKKCGGGS GGGNGNGKKT TPLSALEIET LYWKATVDKP FRVEYANDMP  180
GSAFVPLNAK KSKISSSSEG VSLGETAWNM RGVSRANGSL LKFMKEEIPG VTSPMVYVAM  240
MFSWFAWHVE DHDLHSLNYL HMGAGKTWYG VPREAAVAFE EVVRVHGYGG EINPLVTFAT  300
LGEKTTVMSP EVFISAGVPC CRLVQNAGEF VVTFPRAYHT GFSHGFNCGE AANIATPEWL  360
RVAKDAAIRR ASINYPPMVS HFQLLYDLAL ALHSRMPMGN NAGPRSSRLK DKKKGEGETV  420
VKELFAQNVV QNNELLHILG KGSSIVLLPR SSSDISVCSK LRVGSQLRVN PTLTPGLCSS  480
KEANPGIGQV KNFLPVKGKF GSFYERFDNI CSSNSKTLNT DSERGSTAQG DGLSDQRLFS  540
CVTCGILSFA CVAIVQPRDA ASRYLMTADC SFLNDWTVGS GITGNGFAIA NGDAITSDQN  600
THPGWKEKSI PDGLFDVPVQ SHDGQRQMED QRYEVVSNTE TQREPSALGL LAMTYGNSSD  660
SEDDQGEPDF PACAEQKKLT NSSSESIYQC DNSGLPSMQD CPQGATGVRS PSLSRHGVED  720
GSNQTSDCSA EFRTDDPASR RSDGLMDTFS DPITVSHVSS DCSLDVHDVD QTKFGKENVP  780
RENKNMPFAP RSDEDSSRMH VFCLEHAKEV EKQLRRIGGV HILLLCHPDY PKIVDDAKSL  840
AEEMGIDYPW NNITFRDATK EDEDRIRSAL DSQEAIPGNG DWAVKLGINL FYSANLSRSP  900
LYSKQMPYNS VIYNAFGRCS PASSPKKAKV YRRRSGRQRK VVAGKWCGKV WMSHQVHPFL  960
AKGDSDDEEE EDMSFQTWTM PDEKFEIKSE STHKSETTMV ARKYGRKRKM TVESGSAKKA  1020
KFIDRGDAFF DYSVEDNSHQ QGRTPRGKLA KSVERDEAVS DDSLDNYSHE LQRTSKSKEA  1080
FFDEREDAVS DDSLMDDSHQ QHRRIHRGKQ SKCFDKEDAV SDSSLGHNFH QHNRRIVKSK  1140
IGREAFSDDS LEGNSHQQIK RYNRRNQAKC IEREDAVLDD SLGVNSHKQH RRLPNIKQAT  1200
SIEREDAVSD VPLDDDSHQQ HRRILRNKPM RVEISQPMKK GPPRRVKKGT SWSTKQVTHR  1260
PIKKESPQLM KQQTPRLRNN QSERNSSHIG LLVEEDQEGG PSTRLRKRTK KTVKESEAKP  1320
KAKKQASRIK VRKNASAVKA PAGHNDPKIG DGEVEFLCDI EGCTMSFGSK HELVLHKRNV  1380
CPVKGCGKKF FSHKYLVQHR RVHLDERPLR CPWKGCKMTF KWAWARTEHI RVHTGARPYV  1440
CGEPGCGQTF RFVSDFSRHK RKTGHSAKKG R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	925	940	PKKAKVYRRRSGRQRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein