PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917131.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 462aa MW: 53766.3 Da PI: 8.5218

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.2	1.4e-23	48	132	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA ++GFsvrk+k +++ +ng + +r++vCskeg+++++++ +++ +r +trtgC+a+++ + + +++w+vt+++++HnHela XP_023917131.1 48 LYNDYAIRIGFSVRKEKLRYT-KNG-VRQRDYVCSKEGFPRDSDHL-GDKKFKRLQTRTGCEASIRFTVT-NDEWKVTHFNSNHNHELA 132 7***************999.566.8***********9998.9999**************9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MAEVVAGIQT PPLELNKIDQ DIGAGEKLQD VENLLGMVVH SEEEAYKLYN DYAIRIGFSV 60 RKEKLRYTKN GVRQRDYVCS KEGFPRDSDH LGDKKFKRLQ TRTGCEASIR FTVTNDEWKV 120 THFNSNHNHE LAKPKERPFL RSNRKITDAK LGVIRTFKEA GVNHHWKNVL FGCAFLLDET 180 TASFTWLFET FLESMGNQKP KTIFTDQCQA MKNAIRVVLP DTCHRLCLWH ISKNAAENLP 240 RHYMNPEFKS RFNKILYNCE TEIEFQSCWD TLLRDYNLVG NKWLSTLYEN RERWCSVFSH 300 NIFSCRMKAS SRSESTNNFF QHMACKTMRL TEFVHEYEKA SKNMRTEELE EDFRCKQGTS 360 FQIVQNCGLL QHASSVYTRT MFKRFELEIT STLGVTHQDV NSNGVSSTYE VIERGGRRVC 420 VVHFNSSNNV VTCNYKMFET LGLLCRHALR ILIVKNVTEL PV

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MAEVVAGIQT PPLELNKIDQ DIGAGEKLQD VENLLGMVVH SEEEAYKLYN DYAIRIGFSV  60
RKEKLRYTKN GVRQRDYVCS KEGFPRDSDH LGDKKFKRLQ TRTGCEASIR FTVTNDEWKV  120
THFNSNHNHE LAKPKERPFL RSNRKITDAK LGVIRTFKEA GVNHHWKNVL FGCAFLLDET  180
TASFTWLFET FLESMGNQKP KTIFTDQCQA MKNAIRVVLP DTCHRLCLWH ISKNAAENLP  240
RHYMNPEFKS RFNKILYNCE TEIEFQSCWD TLLRDYNLVG NKWLSTLYEN RERWCSVFSH  300
NIFSCRMKAS SRSESTNNFF QHMACKTMRL TEFVHEYEKA SKNMRTEELE EDFRCKQGTS  360
FQIVQNCGLL QHASSVYTRT MFKRFELEIT STLGVTHQDV NSNGVSSTYE VIERGGRRVC  420
VVHFNSSNNV VTCNYKMFET LGLLCRHALR ILIVKNVTEL PV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-57	FAR1 family protein