PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916993.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 493aa MW: 57803.3 Da PI: 8.3498

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.3	4.4e-12	88	133	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 +fY++YA+++GFsvrk++ ++ g+i++rtf+Cskeg+r+ +k++ XP_023916993.1 88 EFYKQYAHRMGFSVRKQYVRRG-SVGHIKTRTFCCSKEGERAIDKRR 133 6**************99998.6777************998877 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MKSRLFHLLL PVREELVELV RLTRECPVDW GVEQVQGRMA LESVAERRLF AEEAQPIDGS 60 PNTSIKHNKE IKAPMIGMKF DCDDNAYEFY KQYAHRMGFS VRKQYVRRGS VGHIKTRTFC 120 CSKEGERAID KRREQWLFET FLSAMSGKLP KTIFTDQSTA MDNAIKEVFP ESNHRLCVWH 180 IYQNAAKRLH HIFNSSNQFR NDFGNCVYDF EDKNEWIVAW NDMLETFDLT DNPWLCEMFD 240 VKEKWCMVYG RHMFTADMKS TQRSESMNSV LKKYLKSKHG LLQFFGHYSR VLPDKRSQEL 300 QAEFKMRQTT PVLLFDFEML RHAAKLYTPE IFKMFQDEYV KIVDFTIYKA SKSDSITEYR 360 VKYRNKTQEH LVKYEASTTI VQCSCMKFSF LGILCSHALK VLDKKNVKRI PAHYVLKRWT 420 QDAKAGSIKD YRGIDVKGFA RNENCSNLVG QDNVVGLNGL NEESFDCEFL VRQDHVGLYG 480 LYQVLVDPDI DNL

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MKSRLFHLLL PVREELVELV RLTRECPVDW GVEQVQGRMA LESVAERRLF AEEAQPIDGS  60
PNTSIKHNKE IKAPMIGMKF DCDDNAYEFY KQYAHRMGFS VRKQYVRRGS VGHIKTRTFC  120
CSKEGERAID KRREQWLFET FLSAMSGKLP KTIFTDQSTA MDNAIKEVFP ESNHRLCVWH  180
IYQNAAKRLH HIFNSSNQFR NDFGNCVYDF EDKNEWIVAW NDMLETFDLT DNPWLCEMFD  240
VKEKWCMVYG RHMFTADMKS TQRSESMNSV LKKYLKSKHG LLQFFGHYSR VLPDKRSQEL  300
QAEFKMRQTT PVLLFDFEML RHAAKLYTPE IFKMFQDEYV KIVDFTIYKA SKSDSITEYR  360
VKYRNKTQEH LVKYEASTTI VQCSCMKFSF LGILCSHALK VLDKKNVKRI PAHYVLKRWT  420
QDAKAGSIKD YRGIDVKGFA RNENCSNLVG QDNVVGLNGL NEESFDCEFL VRQDHVGLYG  480
LYQVLVDPDI DNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-60	FAR1 family protein