PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023915830.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 237aa    MW: 25981.6 Da    PI: 8.026
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023915830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.3e-1180127454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  XP_023915830.1  80 SKASREKLRRDRLNDKFVELGTILEPG---RPPKTDKAAILIDAVRMVTQL 127
                     5678**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MVTPENNTNW LFDYGLMDDI PVPDANFSVP NPGFTWPVQA LNGSSSVSVE IDGSLGDSDG  60
VKESCPKKRG RSESCCASSS KASREKLRRD RLNDKFVELG TILEPGRPPK TDKAAILIDA  120
VRMVTQLRGE AQKLKDSNSN LQEKIKELKA EKNELRDEKQ RLKAEKEKLE QQMKAMNAQP  180
SYLAPPPAIP AAYAAQGQAP GNKLLPIIGY PGVAMWQFMP PAAVDTSQDH VLRPPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16672PKKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-95bHLH family protein