PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915620.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 955aa MW: 104763 Da PI: 6.9775

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.3	2e-15	521	559	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+e C C++C+Nk e XP_023915620.1 521 CKRCNCKKTKCLKLYCDCFAAGIYCAEPCACQGCFNKPE 559 79**********************************976 PP
2	TCR	49.5	8.2e-16	605	643	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN XP_023915620.1 605 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNI 643 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
MLMGSPQSAA TKTTTTSDSQ SVQESPCLFS DLSPIKPVKA AHVAQGFPRF NSPPLVFTSS 60 RISSNSETFL LKRPQDLLSS KEEISCNDDK EKKSADDPGE SKKSVTQLCR VFITDAHKDA 120 EIKKYAQAQP CSSSGCVDEY FADPVELDTV HSADSANVSL NQSSILPESS ATGLPASKNT 180 IKFDDINDMG KDAGTEVKEP LILSKQAQED LHGKPTFDVK SLNTEEQQRD GRWPTDNAGG 240 GQQGGCDSTP QSLSKPSQIV QMCEDNGENV ATIPHRPGGN LILRDPEASE NQRGLRRRCL 300 QFEEALLNTI ENSAGSLDPT NEVTTSRSPS TVAELKSLES SHADLIAASS RRQVIQSRTN 360 LYPPRYSGNS SLSISKPSSI GLHLNSIVNA VPVTCGATAR LKLAEDYMGV QGMKSASVMN 420 FHSLEKMKSC PISSNVVEKI AFIAEDVRYK TKASIAASSS LCESPHTTEP SNLLKPIEYD 480 TTPHDKRKFN SEEVDSNEKY SQVSPKKKRK KTSSTIDGDG CKRCNCKKTK CLKLYCDCFA 540 AGIYCAEPCA CQGCFNKPEY EDTVLEIRQQ IESRNPLAFA PKIVQHVTEF NNREDRNQVP 600 PSSVRHKRGC NCKKSMCLKK YCECYQANVG CSSGCRCDGC KNIYGKKEEY VATELGVTKE 660 MVRERAGEEK FEGVFNEKLE MVATKEDFLQ AELYDLHFTP LTPSFQCSSH GMAEPKSQLL 720 SRRYLQSPES ELTILSSCVD NTKAPETLNS SDMLPQSKES LNVGSYDWQL DYNNVEVMDQ 780 FSPKGDAVAN ICHLTPLSDQ PLTAMASSTS SKMREWKNIS PVQLSPGTGY VSSSGSLCWR 840 SSPITPMSRF GGTKSLQGLN PNSGFCDIRE DDTPEILKDC ATPRNSVKIS CPNWKRVSPP 900 KRHSRELGSN SSGDLKSGRK FILQGVPSFP PLTPYIDSKG STNQKASNNE DNNSR

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

MLMGSPQSAA TKTTTTSDSQ SVQESPCLFS DLSPIKPVKA AHVAQGFPRF NSPPLVFTSS  60
RISSNSETFL LKRPQDLLSS KEEISCNDDK EKKSADDPGE SKKSVTQLCR VFITDAHKDA  120
EIKKYAQAQP CSSSGCVDEY FADPVELDTV HSADSANVSL NQSSILPESS ATGLPASKNT  180
IKFDDINDMG KDAGTEVKEP LILSKQAQED LHGKPTFDVK SLNTEEQQRD GRWPTDNAGG  240
GQQGGCDSTP QSLSKPSQIV QMCEDNGENV ATIPHRPGGN LILRDPEASE NQRGLRRRCL  300
QFEEALLNTI ENSAGSLDPT NEVTTSRSPS TVAELKSLES SHADLIAASS RRQVIQSRTN  360
LYPPRYSGNS SLSISKPSSI GLHLNSIVNA VPVTCGATAR LKLAEDYMGV QGMKSASVMN  420
FHSLEKMKSC PISSNVVEKI AFIAEDVRYK TKASIAASSS LCESPHTTEP SNLLKPIEYD  480
TTPHDKRKFN SEEVDSNEKY SQVSPKKKRK KTSSTIDGDG CKRCNCKKTK CLKLYCDCFA  540
AGIYCAEPCA CQGCFNKPEY EDTVLEIRQQ IESRNPLAFA PKIVQHVTEF NNREDRNQVP  600
PSSVRHKRGC NCKKSMCLKK YCECYQANVG CSSGCRCDGC KNIYGKKEEY VATELGVTKE  660
MVRERAGEEK FEGVFNEKLE MVATKEDFLQ AELYDLHFTP LTPSFQCSSH GMAEPKSQLL  720
SRRYLQSPES ELTILSSCVD NTKAPETLNS SDMLPQSKES LNVGSYDWQL DYNNVEVMDQ  780
FSPKGDAVAN ICHLTPLSDQ PLTAMASSTS SKMREWKNIS PVQLSPGTGY VSSSGSLCWR  840
SSPITPMSRF GGTKSLQGLN PNSGFCDIRE DDTPEILKDC ATPRNSVKIS CPNWKRVSPP  900
KRHSRELGSN SSGDLKSGRK FILQGVPSFP PLTPYIDSKG STNQKASNNE DNNSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	507	511	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	7e-58	CPP family protein