PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914630.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

E2F/DP

Protein Properties

Length: 465aa MW: 51673.6 Da PI: 4.5317

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.1	2.7e-27	147	212	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_023914630.1 147 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 212 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MSGLQAPNRS PQPQMGQIMQ QPLRRQLPFS SLKPPFASPA DYHRFSDPRR GGAADHDVEA 60 EAIVVKPLQL KRKSETADYE ADSSDRTTVP GFTEVINSSL QTPVSVKGGK ANKTSRLTKC 120 NKSGPQTPVS NVGSPSGNNL TPAGPCRYDS SLGLLTKKFI NLIKHAEDGI LDLNKAAETL 180 EVQKRRIYDI TNVLEGIGLI EKKLKNRIQW KGLDVSRPGE VDENYSSLQA EVENLSIQEH 240 RLDDQIREMQ EQLRDLSENE NNQKWLFVTE EDIKGLPCFQ NETLIAIKAP HGTTLEVPDP 300 DEAVDYPQRR YRVVLRSTMG PIDVYLVSQF EEKFEEIEAP SDFLPSSGLN ENPSMAVVTE 360 ESRGKEIEMH GQDAERLCSD LNASQDFVSG IMKIVPSDVD SDADYWLLSD ADVSITDMWR 420 TEPGVEWNDL STLHEDYAMA NIGIPQPQTP PSNATEGPPA NSTRS

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MSGLQAPNRS PQPQMGQIMQ QPLRRQLPFS SLKPPFASPA DYHRFSDPRR GGAADHDVEA  60
EAIVVKPLQL KRKSETADYE ADSSDRTTVP GFTEVINSSL QTPVSVKGGK ANKTSRLTKC  120
NKSGPQTPVS NVGSPSGNNL TPAGPCRYDS SLGLLTKKFI NLIKHAEDGI LDLNKAAETL  180
EVQKRRIYDI TNVLEGIGLI EKKLKNRIQW KGLDVSRPGE VDENYSSLQA EVENLSIQEH  240
RLDDQIREMQ EQLRDLSENE NNQKWLFVTE EDIKGLPCFQ NETLIAIKAP HGTTLEVPDP  300
DEAVDYPQRR YRVVLRSTMG PIDVYLVSQF EEKFEEIEAP SDFLPSSGLN ENPSMAVVTE  360
ESRGKEIEMH GQDAERLCSD LNASQDFVSG IMKIVPSDVD SDADYWLLSD ADVSITDMWR  420
TEPGVEWNDL STLHEDYAMA NIGIPQPQTP PSNATEGPPA NSTRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-167	E2F/DP family protein