PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914195.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 428aa MW: 46992.4 Da PI: 6.9351

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.9	2.1e-35	35	165	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg...... 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el ++++ +++ + ++++++++++++ + XP_023914195.1 35 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELEELPAWKPTTStiSQQQDQQQHQHQ--Tqilden 127 79**************************************************************6666644433333333333322..2345666 PP TCP 89 .....................................k 89 + XP_023914195.1 128 qnptgihcsavdtiasgsrtattmlgcdggrvsdaniH 165 66777777777777777655555555555444333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MGENHHQATT STRFGIRNGG GEIVEVQGGH IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLIKKAKA AIDELEELPA WKPTTSTISQ QQDQQQHQHQ 120 TQILDENQNP TGIHCSAVDT IASGSRTATT MLGCDGGRVS DANIHNLQHQ MSENPNNNSS 180 SSSSFLPPSL DSDSIADTIK SFFPMGASAE TTQFQNYHPP PDLLSRTSSQ SQDLRLSLQS 240 FHDPILLHQH QAQTHHQNEH EHEHMLFSGA TPLGFDGSSA GWSEHHHHHP AEINRFQRML 300 AWNAGTGAET GSASSSGVGG EFIFNSPPTT STQQLLQPSF FGQNQFFQQR GPLQSSNTPS 360 VRAWIDPTIP TATHPHLIPP TFHQSSISGI GFAPGGFSGF RVPARFQGEE EHDGIFHKLS 420 SASSNSRH

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MGENHHQATT STRFGIRNGG GEIVEVQGGH IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH  60
TAIQFYDVQD RLGYDRPSKA VDWLIKKAKA AIDELEELPA WKPTTSTISQ QQDQQQHQHQ  120
TQILDENQNP TGIHCSAVDT IASGSRTATT MLGCDGGRVS DANIHNLQHQ MSENPNNNSS  180
SSSSFLPPSL DSDSIADTIK SFFPMGASAE TTQFQNYHPP PDLLSRTSSQ SQDLRLSLQS  240
FHDPILLHQH QAQTHHQNEH EHEHMLFSGA TPLGFDGSSA GWSEHHHHHP AEINRFQRML  300
AWNAGTGAET GSASSSGVGG EFIFNSPPTT STQQLLQPSF FGQNQFFQQR GPLQSSNTPS  360
VRAWIDPTIP TATHPHLIPP TFHQSSISGI GFAPGGFSGF RVPARFQGEE EHDGIFHKLS  420
SASSNSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-49	TCP family protein