PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913869.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 295aa    MW: 33421.2 Da    PI: 4.8548
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.8e-32113169258
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                     dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+e+p++++itYeg H h
  XP_023913869.1 113 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSREEPETFIITYEGLHLH 169
                     8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MEEVMRTWSD GLEDELLREL LDNQSPFSVL PESTTELKTS SPFDEETVNR LISTVYSGPT  60
IGDIENALSV TNPNLDQPQQ LPQARISMLD RSLNKVENKY TLKMKSYGNP MNDDGYKWRK  120
YGQKSIKNSP NPRSYYRCTN PRCSAKKQVE RSREEPETFI ITYEGLHLHF AYPYFLPSQS  180
YVNPSTKKPK KSISQAQEPQ DHETQQTKEV QESPENLATS PLLITSEVCL QGWDKEEGMS  240
SQGLLEDMVP FMIRNPPTNT SSNSSSCSSY HSPPTSPSSL SWSTNYSATC FDIGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.17e-54WRKY family protein