PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913672.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 435aa    MW: 49558 Da    PI: 7.0845
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.44.1e-12116161147
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                     +fY++YA+++GFsvrk++ ++    g+i++rtf+Cskeg+r+ +k++
  XP_023913672.1 116 EFYKQYAHRMGFSVRKQYVRRG-SAGHIKRRTFCCSKEGERAIDKRR 161
                     6****************99998.7778**************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MDGGHMQQPP LSPDQLDSPP LHLLPPSLIP PHSVSHSASA APINLPPRTT APTAPTAPSC  60
LGILPNSDKC NGPQFVQEEA QVKPIDGSPN TPSKHNKEIK APIIGMKFDC DDNAYEFYKQ  120
YAHRMGFSVR KQYVRRGSAG HIKRRTFCCS KEGERAIDKR REQDGMLEVV SFHEQHNHEF  180
ASSPMKHMLR SNRKITPAQQ AFADDAEKSG VSIKQTIDLL SMQVGGYENL GFLNVDYKNH  240
VNSKRREALK RGDGRAVMDH FRQISIVDYG HFGDVVCFDT TYRTNSYGRP FAPFIGVNHH  300
KQSIVFGAAL LYDETIMSFK WLFETFLSAM SGKQPKTIFT DQSAAMANAI EDVFPESNHR  360
LCVWHIYQNA AKRLHHIFNS SNQFRNDFSH CVYDFEDENE WIVAWNDMLE TYDLTDNPWL  420
REMFDVKEKW CMSIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-68FAR1 family protein