PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913427.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 540aa MW: 59692.7 Da PI: 6.2259

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913427.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.1	1.3e-10	490	537	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 rW+ E++ l +v+++G+g+Wk+I + Rt+ ++k++w++ XP_023913427.1 490 RWSLLEEDTLRTGVQKYGKGNWKLILNSYRdifDERTEVDLKDKWRNM 537 9******************************99*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MDPDICRWIS EFLMRSTAPD HVIKKVLQVL PVSGADSRFK KTVLLRTIRS EIADASVTET 60 TLQTLELIEE MDRSEGVEIR DSLKAAYCAV AVECTVKYLL GSPDKHGEYF EAVKRVWRGR 120 IGNLEKYGKT ELVTDELTRW RDDLELALWE ANTAKRLTKL NTRTEALRAL RVFLGEAWAL 180 MGPSFLESAA ALIEPSDLQN LSGDQMPANN AGGLAAATVE AAEPAAAAAV VAVVDSSNVG 240 ELGVEEEVGA THPEPTVNGE GSREMGVNDK PAGRGKGKTQ EVNSCAPMIE LLSEIHKGNV 300 LPRCKHVAWH KRSKGGVRIT EEVDTDASPS KYDSLPTPEV NMIREALKSS SLELQAVVND 360 PLPEALHLSE TIIADMVKKD KIHEPSVENQ SGKDIDALNP SVDKGVAAQT TDSGCGNQSC 420 IPQGNATRPS LMERNGTAHT YEWEDSIDGS PGGMTNRAGR PHLPSPKRKI VSPLKKYEVT 480 KFVRRRRLKR WSLLEEDTLR TGVQKYGKGN WKLILNSYRD IFDERTEVDL KDKWRNMTRY

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MDPDICRWIS EFLMRSTAPD HVIKKVLQVL PVSGADSRFK KTVLLRTIRS EIADASVTET  60
TLQTLELIEE MDRSEGVEIR DSLKAAYCAV AVECTVKYLL GSPDKHGEYF EAVKRVWRGR  120
IGNLEKYGKT ELVTDELTRW RDDLELALWE ANTAKRLTKL NTRTEALRAL RVFLGEAWAL  180
MGPSFLESAA ALIEPSDLQN LSGDQMPANN AGGLAAATVE AAEPAAAAAV VAVVDSSNVG  240
ELGVEEEVGA THPEPTVNGE GSREMGVNDK PAGRGKGKTQ EVNSCAPMIE LLSEIHKGNV  300
LPRCKHVAWH KRSKGGVRIT EEVDTDASPS KYDSLPTPEV NMIREALKSS SLELQAVVND  360
PLPEALHLSE TIIADMVKKD KIHEPSVENQ SGKDIDALNP SVDKGVAAQT TDSGCGNQSC  420
IPQGNATRPS LMERNGTAHT YEWEDSIDGS PGGMTNRAGR PHLPSPKRKI VSPLKKYEVT  480
KFVRRRRLKR WSLLEEDTLR TGVQKYGKGN WKLILNSYRD IFDERTEVDL KDKWRNMTRY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	467	487	KRKIVSPLKKYEVTKFVRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	1e-22	MYB_related family protein