PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913236.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 217aa    MW: 25117.5 Da    PI: 9.461
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR198.57.4e-3148135290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+ + k+ +++r++ra tr gCka+++vkkek+gkw+vt++++eHnH+l+
  XP_023913236.1  48 FYDAYATRMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPKR-SENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 135
                     9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDEHHSSGED GDMIESSNGK DLVSTEGSSD MEPYVGMDFE SEEAAKVFYD AYATRMGFIM  60
RVDAFRRSMR DGKVVWRRLV CNKEGFRKLR PKRSENRKPR AITREGCKAM IVVKKEKTGK  120
WVVTRFVKEH NHPLVVTPAN GRRSVLLSQT PDEKDVKIRE LTAELQRERK RSAAFQEQLD  180
MVLRDMEDHS HHLSRNIDDI VQSVREIESK RLALSHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-97FAR1 family protein