PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913219.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 371aa MW: 41703.5 Da PI: 10.2469

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	148.2	5.7e-46	95	249	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssaseceaesssssasns 85 ++kkdrhski+T++g+RdRRvRls+e+a++fFdLqd+LGfdk+skt++WLl+++ +aike ++ ss++ +ce +s+ ++ + XP_023913219.1 95 PVKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASKTLDWLLTKSRKAIKEVAKMkqncngcaktsLSSTNFDCEVVSRINQITDN 189 68************************************************************5555554443222222455555555555533 PP TCP 86 ssg...........kaaksaa.kskksqksaasalnlakesrakarararertrekmrik 133 + + +a s+ ++k ++ ++ + + lakesrakarararertrek +++ XP_023913219.1 190 GGNlegivlsknnsSALLSTIsNKKMRKLNKDEIHLLAKESRAKARARARERTREKLCTR 249 333778888777653333333344444444555689999*****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MFSSTNSLNF SPHFPPSSYQ PFPLPFSNHH LQLSDEIFLH QEHQNDPLAL AGPVLPIPET 60 VINFSVSNNP IMTRPSNNIN IGNPFGVSNF LAKKPVKKDR HSKIYTSQGL RDRRVRLSIE 120 IARKFFDLQD MLGFDKASKT LDWLLTKSRK AIKEVAKMKQ NCNGCAKTSL SSTNFDCEVV 180 SRINQITDNG GNLEGIVLSK NNSSALLSTI SNKKMRKLNK DEIHLLAKES RAKARARARE 240 RTREKLCTRK CPAPGCSQIL QQLKPPTQLE ACERSSKVVE GEIQQQPSSH MFEESIMIRR 300 KLKPAGRLGY QPNLSSSNNE SSNYFPNSPL NWDINSTNAR FSFYAITNTN LSTELQICGK 360 SLEGSTNQLL H

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MFSSTNSLNF SPHFPPSSYQ PFPLPFSNHH LQLSDEIFLH QEHQNDPLAL AGPVLPIPET  60
VINFSVSNNP IMTRPSNNIN IGNPFGVSNF LAKKPVKKDR HSKIYTSQGL RDRRVRLSIE  120
IARKFFDLQD MLGFDKASKT LDWLLTKSRK AIKEVAKMKQ NCNGCAKTSL SSTNFDCEVV  180
SRINQITDNG GNLEGIVLSK NNSSALLSTI SNKKMRKLNK DEIHLLAKES RAKARARARE  240
RTREKLCTRK CPAPGCSQIL QQLKPPTQLE ACERSSKVVE GEIQQQPSSH MFEESIMIRR  300
KLKPAGRLGY QPNLSSSNNE SSNYFPNSPL NWDINSTNAR FSFYAITNTN LSTELQICGK  360
SLEGSTNQLL H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	5e-33	TCP family protein