PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913138.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family TCP
Protein Properties Length: 326aa    MW: 37436.2 Da    PI: 6.9618
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP97.82.1e-30772253133
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssaseceaesssssas...n 84 
                      k+d+  k+ T++g+R RR+Rls+++a  fF+Lqd LG  ++skt+eWLl ++k +ik+l             s+ss s+c+++s  + ++    
  XP_023913138.1  77 RKRDQRVKVNTARGPRERRMRLSVKVAPDFFKLQDLLGCETASKTLEWLLINSKDEIKKLEIEkkhsfgvgvkSASSTSKCQTVSGINPVAihdR 171
                     5899999*****************************************************99989999998876666677744444433333221 PP

             TCP  85 sssg........kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                        +        k +++++k ++s  ++++++ la+esr+kar+rarer r kmr +
  XP_023913138.1 172 ---DqqnsvleeKTSAKEKKIRQSVLRKSAFHPLARESRKKARERARERARVKMRSR 225
                     ...1234456644444444777778888888***********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MTSIPVVETQ TLLLDPSYED NDILFQHIYD LLFHQHSLMM RAENTLTEAV ANSNMMNFNN  60
SDINVHMAEH IPRKRSRKRD QRVKVNTARG PRERRMRLSV KVAPDFFKLQ DLLGCETASK  120
TLEWLLINSK DEIKKLEIEK KHSFGVGVKS ASSTSKCQTV SGINPVAIHD RDQQNSVLEE  180
KTSAKEKKIR QSVLRKSAFH PLARESRKKA RERARERARV KMRSRVDESK LCEVAGNCNL  240
SQLGSWSKFE SEEESGTQSH NMNTFELREL PEAEEGSVHA GEHLGASEDM VDDDYLLIFN  300
SHNAGILPER QFADFEFFDE PWDAYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-15TCP family protein