PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913120.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 390aa MW: 44204.8 Da PI: 6.2987

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.8	1.6e-37	123	279	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 k+drhski T++g+RdRR+Rls+++a +fF Lq+ LG+d++s t+eWLl ++k +i +l + + s+++++++ s+sa++s s+ XP_023913120.1 123 CKRDRHSKINTARGPRDRRMRLSLKVAPEFFGLQELLGYDTASRTVEWLLLKSKDEITKLEREKKRSSTSTSTVGGSKSANSSASDecevvsgid 217 69***********************************************************65555444222222222222222345566666 PP TCP 89 .................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 k +++++k ++sq+++++++ la+esr+karararert+ek ++ XP_023913120.1 218 dvavncdgdqqgsvsqeKPSTKEKKIRHSQSRKSAFHPLARESREKARARARERTKEKLKLM 279 6777777777778888655666668888888888899999****************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MQLKSQMYTS NSNNGNDPIS YCDQPFFQRP LFNDVNNPNS NSNSKHEDPS LLSFLNFPSP 60 FEDDYVFFPH NHDMLFQFQH QSCLLRPDNN TITETTVPNS INMVDSNKNH INMVELIPRK 120 RSCKRDRHSK INTARGPRDR RMRLSLKVAP EFFGLQELLG YDTASRTVEW LLLKSKDEIT 180 KLEREKKRSS TSTSTVGGSK SANSSASDEC EVVSGIDDVA VNCDGDQQGS VSQEKPSTKE 240 KKIRHSQSRK SAFHPLARES REKARARARE RTKEKLKLMR SQVDDSKLCE EASRLGSWSP 300 FETGEESGTQ SQNMNPSSLD LEVLPEAEEG SSTHARDHSG AVEDMVNSED YLVFLAFNSL 360 HSTGFPQELQ FSEFPFFGKP WEANSNNNQC

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MQLKSQMYTS NSNNGNDPIS YCDQPFFQRP LFNDVNNPNS NSNSKHEDPS LLSFLNFPSP  60
FEDDYVFFPH NHDMLFQFQH QSCLLRPDNN TITETTVPNS INMVDSNKNH INMVELIPRK  120
RSCKRDRHSK INTARGPRDR RMRLSLKVAP EFFGLQELLG YDTASRTVEW LLLKSKDEIT  180
KLEREKKRSS TSTSTVGGSK SANSSASDEC EVVSGIDDVA VNCDGDQQGS VSQEKPSTKE  240
KKIRHSQSRK SAFHPLARES REKARARARE RTKEKLKLMR SQVDDSKLCE EASRLGSWSP  300
FETGEESGTQ SQNMNPSSLD LEVLPEAEEG SSTHARDHSG AVEDMVNSED YLVFLAFNSL  360
HSTGFPQELQ FSEFPFFGKP WEANSNNNQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	2e-24	TCP family protein