PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912932.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HSF

Protein Properties

Length: 363aa MW: 41468.8 Da PI: 5.1105

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.5	3.3e-36	42	133	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw++ g+sfvv+d+++f++++Lp++Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+++ll++ XP_023912932.1 42 FLNKTYDMVDDPTTNHIVSWNRGGTSFVVWDPHSFSTNLLPRHFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFLRGQRRLLRN 127 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+k XP_023912932.1 128 IKRRKA 133 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNPLYPIKEV YLGSSSSQPP RPPMMPPPQP MEGLHDTGPP PFLNKTYDMV DDPTTNHIVS 60 WNRGGTSFVV WDPHSFSTNL LPRHFKHNNF SSFVRQLNTY GFRKIDPDRW EFANEGFLRG 120 QRRLLRNIKR RKAPPQPFLP QQALGPCVEL GRFGLDGGID HSRHDKQVLV MELMKLKQQQ 180 QTTRAYLQLM EQRLQGTEKK QQQMMSFLAR AMQNPTFLQQ LVQQREKRKE LEEAMTKKRR 240 RPIDQGPSGV SGVGQSSQGG EGSNQIKLEP LEFGDYVFEE SELEALAMEM QGFGRARKVQ 300 EEGNEELMPP ESGDKELDEG FWEELFNETF EEELGILDAE GGEDEDVNVL LADCVGYLGS 360 SPK

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNPLYPIKEV YLGSSSSQPP RPPMMPPPQP MEGLHDTGPP PFLNKTYDMV DDPTTNHIVS  60
WNRGGTSFVV WDPHSFSTNL LPRHFKHNNF SSFVRQLNTY GFRKIDPDRW EFANEGFLRG  120
QRRLLRNIKR RKAPPQPFLP QQALGPCVEL GRFGLDGGID HSRHDKQVLV MELMKLKQQQ  180
QTTRAYLQLM EQRLQGTEKK QQQMMSFLAR AMQNPTFLQQ LVQQREKRKE LEEAMTKKRR  240
RPIDQGPSGV SGVGQSSQGG EGSNQIKLEP LEFGDYVFEE SELEALAMEM QGFGRARKVQ  300
EEGNEELMPP ESGDKELDEG FWEELFNETF EEELGILDAE GGEDEDVNVL LADCVGYLGS  360
SPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	241	KRKELEEAMTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-106	HSF family protein