PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912859.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 447aa MW: 49768.4 Da PI: 5.5999

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.1	6.9e-18	95	184	2	99
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +k+++ps+v+ +l lpk+f+++h +++ ++ledesg+ +e k+ + + l++GW++F +++L egD+vvF+l++ s+f +v XP_023912859.1 95 VKTMLPSNVTGGFWLGLPKHFCRAHlP---MQDTAIVLEDESGEAFETKY--LAEK--VGLSAGWRGFSISHKLMEGDIVVFHLVKPSKF--KVY 180 699********************42...45678***********..4444..55**********************998888..888 PP EE-S CS B3 96 vfrk 99 ++r+ XP_023912859.1 181 IVRS 184 8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MAVADQKQSQ CPTVSSPKKR RRPAKTMGKL LLKKVPGFNQ MADKQAVNNK NLQGPKRLKR 60 ATVDSLYDTF EAQSCVLEQA KEIQANLEPE FLSLVKTMLP SNVTGGFWLG LPKHFCRAHL 120 PMQDTAIVLE DESGEAFETK YLAEKVGLSA GWRGFSISHK LMEGDIVVFH LVKPSKFKVY 180 IVRSNGSDEV DGALALLKLD AGMKLMKYDK DTKACEEPVY EALKTLSQEN TQKNSIMVCV 240 TDPGPMVDLS EDDSDIGSEI LDGIRLSDSV VDFKQVRSIE DFSVLVNGLV INSELPKFLL 300 TKYFELCCSQ KSFLHEHLLE GLNCKLAAGM ISETINVADA IRACKISTSQ ESLSTWDKTL 360 KAFEVLGMNV GFLRARLEQL LNISLKLKRY KEATLVRAQA EEEVQTLEAK LLEVKEKINS 420 LDAEIENLDV AADKLELAFQ EVANAPW

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MAVADQKQSQ CPTVSSPKKR RRPAKTMGKL LLKKVPGFNQ MADKQAVNNK NLQGPKRLKR  60
ATVDSLYDTF EAQSCVLEQA KEIQANLEPE FLSLVKTMLP SNVTGGFWLG LPKHFCRAHL  120
PMQDTAIVLE DESGEAFETK YLAEKVGLSA GWRGFSISHK LMEGDIVVFH LVKPSKFKVY  180
IVRSNGSDEV DGALALLKLD AGMKLMKYDK DTKACEEPVY EALKTLSQEN TQKNSIMVCV  240
TDPGPMVDLS EDDSDIGSEI LDGIRLSDSV VDFKQVRSIE DFSVLVNGLV INSELPKFLL  300
TKYFELCCSQ KSFLHEHLLE GLNCKLAAGM ISETINVADA IRACKISTSQ ESLSTWDKTL  360
KAFEVLGMNV GFLRARLEQL LNISLKLKRY KEATLVRAQA EEEVQTLEAK LLEVKEKINS  420
LDAEIENLDV AADKLELAFQ EVANAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	17	23	PKKRRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-40	B3 family protein